Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ain-1 | ain-2 | C06G1.4.1 | B0041.2d.1 | ALG-1 INteracting protein. | ALG-1 INteracting protein. | 0.904 |
| ain-1 | alg-1 | C06G1.4.1 | F48F7.1b.1 | ALG-1 INteracting protein. | Protein argonaute; Belongs to the argonaute family. | 0.996 |
| ain-1 | dcr-1 | C06G1.4.1 | K12H4.8.2 | ALG-1 INteracting protein. | Death-promoting deoxyribonuclease; Involved in cleaving double-stranded RNA in the RNA interference (RNAi) pathway. It produces 21 to 23 bp dsRNAs (siRNAs) which target the selective destruction of homologous RNAs. Seems to process the precursor of the small temporal RNA let-7 which is involved in developmental timing. Belongs to the helicase family. Dicer subfamily. | 0.751 |
| ain-1 | hbl-1 | C06G1.4.1 | F13D11.2a.1 | ALG-1 INteracting protein. | Hunchback-like protein; Required for the late stages of development. Plays a role in the developmental timing of postembryonic hypodermal seam cell fusion events and adult alae production. | 0.650 |
| ain-1 | lin-14 | C06G1.4.1 | T25C12.1a.1 | ALG-1 INteracting protein. | Protein lin-14; Heterochronic protein which controls the choice of stage specific cell fates. Involved in the temporal progression of vulval fate patterning, possibly by inhibiting lin-12. Acts as a transcription factor involved in the stage-specific repression of insulin/insulin- like growth factor gene ins-33. Isoform A may be involved in specifying L1 cell fates while isoform B1 and isoform B2 may specify L2 and later cell fates, creating a temporal switch. | 0.661 |
| ain-1 | lin-28 | C06G1.4.1 | F02E9.2a.1 | ALG-1 INteracting protein. | Protein lin-28; Heterochronic protein which controls the choice of stage specific cell fates. Regulates the timing of the second larval stage events (L2 events) in the hypodermis. May negatively regulate the larval to adult transition via the suppression of the microRNA (miRNA) let-7 during L3. Plays a role in the control of seam cell number and vulval development. Belongs to the lin-28 family. | 0.690 |
| ain-1 | lin-41 | C06G1.4.1 | C12C8.3a.1 | ALG-1 INteracting protein. | Protein lin-41; Heterochronic protein which acts downstream of let-7 in temporal patterning. Plays a role in the developmental timing of postembryonic hypodermal seam cell division and fusion events and adult alae production. Represses lin-29 during late larval stages, which prevents terminal differentiation of hypodermal seam cells and promotes their division. Involved in post-transcriptional gene regulation, uses two independent pathways. Has direct and specific RNA-binding activity and, depending on the location (5'UTR or 3'UTR) of the target site, triggers either mRNA decay or repr [...] | 0.707 |
| ain-1 | nhl-2 | C06G1.4.1 | F26F4.7.1 | ALG-1 INteracting protein. | NHL (Ring finger b-box coiled coil) domain containing. | 0.916 |
| ain-1 | pash-1 | C06G1.4.1 | T22A3.5a.1 | ALG-1 INteracting protein. | PArtner of DroSHa (DRSH-1 interactor). | 0.413 |
| ain-1 | xrn-2 | C06G1.4.1 | Y48B6A.3.1 | ALG-1 INteracting protein. | 5'-3' exoribonuclease 2 homolog; Possesses 5'->3' exoribonuclease activity. Plays a role in maintenance of steady-state concentration and turnover of microRNAs (miRNA) by degradation of mature miRNA. Degradation role is enhanced when in complex with paxt-1. Partially redundant to xrn-1 in miRNA guide strand degradation. Implicated in differential regulation of mRNAs such as let-7 by controlling the accumulation of mature miRNA. Positively regulates molting of the pharyngeal cuticle. | 0.465 |
| ain-2 | ain-1 | B0041.2d.1 | C06G1.4.1 | ALG-1 INteracting protein. | ALG-1 INteracting protein. | 0.904 |
| ain-2 | alg-1 | B0041.2d.1 | F48F7.1b.1 | ALG-1 INteracting protein. | Protein argonaute; Belongs to the argonaute family. | 0.972 |
| ain-2 | dcr-1 | B0041.2d.1 | K12H4.8.2 | ALG-1 INteracting protein. | Death-promoting deoxyribonuclease; Involved in cleaving double-stranded RNA in the RNA interference (RNAi) pathway. It produces 21 to 23 bp dsRNAs (siRNAs) which target the selective destruction of homologous RNAs. Seems to process the precursor of the small temporal RNA let-7 which is involved in developmental timing. Belongs to the helicase family. Dicer subfamily. | 0.608 |
| ain-2 | hbl-1 | B0041.2d.1 | F13D11.2a.1 | ALG-1 INteracting protein. | Hunchback-like protein; Required for the late stages of development. Plays a role in the developmental timing of postembryonic hypodermal seam cell fusion events and adult alae production. | 0.490 |
| ain-2 | lin-14 | B0041.2d.1 | T25C12.1a.1 | ALG-1 INteracting protein. | Protein lin-14; Heterochronic protein which controls the choice of stage specific cell fates. Involved in the temporal progression of vulval fate patterning, possibly by inhibiting lin-12. Acts as a transcription factor involved in the stage-specific repression of insulin/insulin- like growth factor gene ins-33. Isoform A may be involved in specifying L1 cell fates while isoform B1 and isoform B2 may specify L2 and later cell fates, creating a temporal switch. | 0.428 |
| ain-2 | lin-41 | B0041.2d.1 | C12C8.3a.1 | ALG-1 INteracting protein. | Protein lin-41; Heterochronic protein which acts downstream of let-7 in temporal patterning. Plays a role in the developmental timing of postembryonic hypodermal seam cell division and fusion events and adult alae production. Represses lin-29 during late larval stages, which prevents terminal differentiation of hypodermal seam cells and promotes their division. Involved in post-transcriptional gene regulation, uses two independent pathways. Has direct and specific RNA-binding activity and, depending on the location (5'UTR or 3'UTR) of the target site, triggers either mRNA decay or repr [...] | 0.577 |
| ain-2 | nhl-2 | B0041.2d.1 | F26F4.7.1 | ALG-1 INteracting protein. | NHL (Ring finger b-box coiled coil) domain containing. | 0.821 |
| alg-1 | ain-1 | F48F7.1b.1 | C06G1.4.1 | Protein argonaute; Belongs to the argonaute family. | ALG-1 INteracting protein. | 0.996 |
| alg-1 | ain-2 | F48F7.1b.1 | B0041.2d.1 | Protein argonaute; Belongs to the argonaute family. | ALG-1 INteracting protein. | 0.972 |
| alg-1 | dcr-1 | F48F7.1b.1 | K12H4.8.2 | Protein argonaute; Belongs to the argonaute family. | Death-promoting deoxyribonuclease; Involved in cleaving double-stranded RNA in the RNA interference (RNAi) pathway. It produces 21 to 23 bp dsRNAs (siRNAs) which target the selective destruction of homologous RNAs. Seems to process the precursor of the small temporal RNA let-7 which is involved in developmental timing. Belongs to the helicase family. Dicer subfamily. | 0.991 |
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