(17 nodes) Elongator holoenzyme complex network (Galerina marginata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A067SGL6	Uncharacterized protein. (285 aa)
	A0A067SNA4	DPBB_1 domain-containing protein. (103 aa)
	A0A067SPX8	Expansin-like EG45 domain-containing protein. (129 aa)
	A0A067SQU0	Uncharacterized protein. (241 aa)
	A0A067SRW1	Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. (554 aa)
	A0A067SSP9	Uncharacterized protein. (348 aa)
	A0A067STX7	DPBB_1 domain-containing protein. (286 aa)
	A0A067SXH5	Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family. (1329 aa)
	A0A067TAG9	Uncharacterized protein. (155 aa)
	A0A067TEL0	DPBB_1 domain-containing protein. (293 aa)
	A0A067TGV0	Uncharacterized protein. (141 aa)
	A0A067TJX3	Uncharacterized protein. (84 aa)
	A0A067TKN6	Uncharacterized protein. (788 aa)
	A0A067TPD4	DPBB_1 domain-containing protein. (95 aa)
	A0A067TPR9	Uncharacterized protein. (355 aa)
	A0A067TRW0	N-acetyltransferase domain-containing protein. (253 aa)
	A0A067U123	Uncharacterized protein. (345 aa)

Your Current Organism:

Galerina marginata

NCBI taxonomy Id: 685588
Other names: G. marginata CBS 339.88, Galerina marginata CBS 339.88

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A067SGL6	A0A067SNA4	Uncharacterized protein.	DPBB_1 domain-containing protein.	0.650
A0A067SGL6	A0A067SPX8	Uncharacterized protein.	Expansin-like EG45 domain-containing protein.	0.650
A0A067SGL6	A0A067SRW1	Uncharacterized protein.	Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation.	0.444
A0A067SGL6	A0A067STX7	Uncharacterized protein.	DPBB_1 domain-containing protein.	0.650
A0A067SGL6	A0A067TEL0	Uncharacterized protein.	DPBB_1 domain-containing protein.	0.650
A0A067SGL6	A0A067TGV0	Uncharacterized protein.	Uncharacterized protein.	0.650
A0A067SGL6	A0A067TPD4	Uncharacterized protein.	DPBB_1 domain-containing protein.	0.650
A0A067SGL6	A0A067TPR9	Uncharacterized protein.	Uncharacterized protein.	0.845
A0A067SGL6	A0A067U123	Uncharacterized protein.	Uncharacterized protein.	0.650
A0A067SNA4	A0A067SGL6	DPBB_1 domain-containing protein.	Uncharacterized protein.	0.650
A0A067SNA4	A0A067SQU0	DPBB_1 domain-containing protein.	Uncharacterized protein.	0.650
A0A067SNA4	A0A067SRW1	DPBB_1 domain-containing protein.	Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation.	0.912
A0A067SNA4	A0A067SSP9	DPBB_1 domain-containing protein.	Uncharacterized protein.	0.650
A0A067SNA4	A0A067SXH5	DPBB_1 domain-containing protein.	Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family.	0.933
A0A067SNA4	A0A067TAG9	DPBB_1 domain-containing protein.	Uncharacterized protein.	0.758
A0A067SNA4	A0A067TJX3	DPBB_1 domain-containing protein.	Uncharacterized protein.	0.541
A0A067SNA4	A0A067TKN6	DPBB_1 domain-containing protein.	Uncharacterized protein.	0.928
A0A067SNA4	A0A067TPR9	DPBB_1 domain-containing protein.	Uncharacterized protein.	0.965
A0A067SPX8	A0A067SGL6	Expansin-like EG45 domain-containing protein.	Uncharacterized protein.	0.650
A0A067SPX8	A0A067SQU0	Expansin-like EG45 domain-containing protein.	Uncharacterized protein.	0.650