STRINGSTRING
GLE_2920 GLE_2920 GLE_3005 GLE_3005 GLE_3013 GLE_3013 GLE_4821 GLE_4821 GLE_4243 GLE_4243 gmd gmd manA manA galE galE rfbB rfbB nodL nodL GLE_1409 GLE_1409 GLE_1146 GLE_1146 GLE_0780 GLE_0780 glmU glmU GLE_0173 GLE_0173 rfbD rfbD rfbC rfbC rfbA rfbA wecC wecC GLE_2255 GLE_2255 GLE_2487 GLE_2487 ugd ugd galU galU
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GLE_2920Epimerase/dehydratase. (633 aa)
GLE_3005Nucleotide sugar dehydrogenase family protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (429 aa)
GLE_3013NAD dependent epimerase/dehydratase family protein. (327 aa)
GLE_4821Cupin superfamily protein. (126 aa)
GLE_4243NAD dependent epimerase/dehydratase family protein. (311 aa)
gmdGDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. (324 aa)
manAMannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family. (470 aa)
galEUDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (338 aa)
rfbBdTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. (350 aa)
nodLNodulation protein L. (196 aa)
GLE_1409Cupin domain protein. (103 aa)
GLE_1146Cupin domain protein. (101 aa)
GLE_0780Cupin domain protein. (123 aa)
glmUUDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. (461 aa)
GLE_0173NAD-dependent epimerase/dehydratase family protein. (321 aa)
rfbDdTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. (305 aa)
rfbCdTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. (185 aa)
rfbAGlucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. (294 aa)
wecCNDP-N-acetyl-D-galactosaminuronic acid dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (418 aa)
GLE_2255UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. (799 aa)
GLE_2487UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (331 aa)
ugdUdp-glucose 6-dehydrogenase. (447 aa)
galUUTP-glucose-1-phosphate uridylyltransferase. (300 aa)
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.