STRINGSTRING
CLS_05190 CLS_05190 CLS_05180 CLS_05180 CLS_05170 CLS_05170 CLS_05160 CLS_05160 CLS_04530 CLS_04530 CLS_04520 CLS_04520 CLS_04510 CLS_04510 CLS_04480 CLS_04480 CLS_15150 CLS_15150 CLS_09320 CLS_09320 CLS_07920 CLS_07920
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CLS_05190DNA binding domain, excisionase family. (86 aa)
CLS_05180DNA binding domain, excisionase family. (83 aa)
CLS_05170DNA binding domain, excisionase family. (233 aa)
CLS_05160DNA binding domain, excisionase family. (68 aa)
CLS_04530DNA binding domain, excisionase family. (76 aa)
CLS_04520DNA binding domain, excisionase family. (77 aa)
CLS_04510DNA binding domain, excisionase family. (219 aa)
CLS_04480Hypothetical protein. (84 aa)
CLS_15150DNA binding domain, excisionase family. (58 aa)
CLS_09320DNA binding domain, excisionase family. (57 aa)
CLS_07920Excisionase from transposon Tn916. (68 aa)
Your Current Organism:
Clostridium saccharolyticum K10
NCBI taxonomy Id: 717608
Other names: Clostridium cf. saccharolyticum K10, [. cf. saccharolyticum K10, [Clostridium] cf. saccharolyticum K10
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