STRINGSTRING
BMF94_7044 BMF94_7044 BMF94_5580 BMF94_5580 BMF94_4666 BMF94_4666 BMF94_4491 BMF94_4491 BMF94_4227 BMF94_4227 BMF94_3808 BMF94_3808 BMF94_3003 BMF94_3003 BMF94_1842 BMF94_1842 BMF94_1285 BMF94_1285 BMF94_0767 BMF94_0767 BMF94_0158 BMF94_0158
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BMF94_7044Uncharacterized protein. (1159 aa)
BMF94_5580Uncharacterized protein. (1484 aa)
BMF94_4666Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. BET3 subfamily. (260 aa)
BMF94_4491Rab-GAP TBC domain-containing protein. (628 aa)
BMF94_4227Uncharacterized protein. (738 aa)
BMF94_3808Uncharacterized protein. (416 aa)
BMF94_3003Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (232 aa)
BMF94_1842Uncharacterized protein. (169 aa)
BMF94_1285Uncharacterized protein. (1997 aa)
BMF94_0767Trafficking protein particle complex subunit BET3. (206 aa)
BMF94_0158Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (141 aa)
Your Current Organism:
Rhodotorula taiwanensis
NCBI taxonomy Id: 741276
Other names: A1-01, BCRC 23118, CBS 11729, R. taiwanensis, Rhodotorula sp. BCRC 23118, Rhodotorula taiwanensis Lee & Huang 2011
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