STRINGSTRING
BMF94_3003 BMF94_3003 BMF94_6983 BMF94_6983 BMF94_6967 BMF94_6967 BMF94_6868 BMF94_6868 BMF94_6968 BMF94_6968 BMF94_6845 BMF94_6845 BMF94_6612 BMF94_6612 BMF94_6622 BMF94_6622 BMF94_6666 BMF94_6666 BMF94_6525 BMF94_6525 BMF94_6422 BMF94_6422 BMF94_6420 BMF94_6420 BMF94_6469 BMF94_6469 BMF94_6142 BMF94_6142 BMF94_6241 BMF94_6241 BMF94_6258 BMF94_6258 BMF94_6113 BMF94_6113 BMF94_5918 BMF94_5918 BMF94_6119 BMF94_6119 BMF94_5952 BMF94_5952 BMF94_5477 BMF94_5477 BMF94_5531 BMF94_5531 BMF94_5580 BMF94_5580 BMF94_5579 BMF94_5579 BMF94_5649 BMF94_5649 BMF94_5690 BMF94_5690 BMF94_5750 BMF94_5750 BMF94_5449 BMF94_5449 BMF94_5091 BMF94_5091 BMF94_5119 BMF94_5119 BMF94_5128 BMF94_5128 BMF94_5170 BMF94_5170 BMF94_5169 BMF94_5169 BMF94_5162 BMF94_5162 BMF94_5040 BMF94_5040 BMF94_4963 BMF94_4963 BMF94_4989 BMF94_4989 BMF94_4905 BMF94_4905 BMF94_4896 BMF94_4896 BMF94_4576 BMF94_4576 BMF94_4628 BMF94_4628 BMF94_4666 BMF94_4666 BMF94_4657 BMF94_4657 BMF94_4690 BMF94_4690 BMF94_4256 BMF94_4256 BMF94_4343 BMF94_4343 BMF94_4368 BMF94_4368 BMF94_7078 BMF94_7078 BMF94_4422 BMF94_4422 BMF94_4408 BMF94_4408 BMF94_4541 BMF94_4541 BMF94_4227 BMF94_4227 BMF94_4004 BMF94_4004 BMF94_3860 BMF94_3860 BMF94_3864 BMF94_3864 BMF94_3885 BMF94_3885 BMF94_3907 BMF94_3907 BMF94_3848 BMF94_3848 BMF94_3808 BMF94_3808 BMF94_3540 BMF94_3540 BMF94_3435 BMF94_3435 BMF94_3465 BMF94_3465 BMF94_3509 BMF94_3509 BMF94_3232 BMF94_3232 BMF94_3320 BMF94_3320 BMF94_3355 BMF94_3355 BMF94_3371 BMF94_3371 BMF94_3352 BMF94_3352 BMF94_3026 BMF94_3026 BMF94_3054 BMF94_3054 BMF94_3074 BMF94_3074 BMF94_3084 BMF94_3084 BMF94_6984 BMF94_6984 BMF94_2817 BMF94_2817 BMF94_2931 BMF94_2931 BMF94_2925 BMF94_2925 BMF94_2947 BMF94_2947 BMF94_2737 BMF94_2737 BMF94_2572 BMF94_2572 BMF94_2643 BMF94_2643 BMF94_2391 BMF94_2391 BMF94_2427 BMF94_2427 BMF94_2448 BMF94_2448 BMF94_2433 BMF94_2433 BMF94_2176 BMF94_2176 BMF94_2239 BMF94_2239 BMF94_2118 BMF94_2118 BMF94_1899 BMF94_1899 BMF94_1957 BMF94_1957 BMF94_2007 BMF94_2007 BMF94_1799 BMF94_1799 BMF94_1842 BMF94_1842 BMF94_1549 BMF94_1549 BMF94_1486 BMF94_1486 BMF94_1189 BMF94_1189 BMF94_1285 BMF94_1285 BMF94_1305 BMF94_1305 BMF94_1145 BMF94_1145 BMF94_1353 BMF94_1353 BMF94_1183 BMF94_1183 BMF94_0960 BMF94_0960 BMF94_1014 BMF94_1014 BMF94_1008 BMF94_1008 BMF94_1015 BMF94_1015 BMF94_0729 BMF94_0729 BMF94_0082 BMF94_0082 BMF94_0046 BMF94_0046 BMF94_0288 BMF94_0288 BMF94_0164 BMF94_0164 BMF94_0158 BMF94_0158 BMF94_0656 BMF94_0656 BMF94_0658 BMF94_0658 BMF94_0500 BMF94_0500 BMF94_0483 BMF94_0483 BMF94_0901 BMF94_0901 BMF94_0866 BMF94_0866 BMF94_0867 BMF94_0867 BMF94_0841 BMF94_0841 BMF94_0767 BMF94_0767 BMF94_0727 BMF94_0727 BMF94_7044 BMF94_7044 BMF94_7014 BMF94_7014
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BMF94_3003Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (232 aa)
BMF94_6983ENTH domain-containing protein. (536 aa)
BMF94_6967Uncharacterized protein. (187 aa)
BMF94_6868Uncharacterized protein. (1070 aa)
BMF94_6968Uncharacterized protein. (193 aa)
BMF94_6845Uncharacterized protein. (1026 aa)
BMF94_6612AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (217 aa)
BMF94_6622Exocyst complex component SEC5; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family. (1008 aa)
BMF94_6666Uncharacterized protein. (344 aa)
BMF94_6525Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. (194 aa)
BMF94_6422PhoLip_ATPase_N domain-containing protein. (581 aa)
BMF94_6420Uncharacterized protein. (1724 aa)
BMF94_6469Exocyst complex component SEC15; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. (812 aa)
BMF94_6142Uncharacterized protein. (115 aa)
BMF94_6241Uncharacterized protein. (546 aa)
BMF94_6258DUF1992 domain-containing protein. (516 aa)
BMF94_6113Uncharacterized protein. (483 aa)
BMF94_5918Uncharacterized protein. (414 aa)
BMF94_6119Uncharacterized protein. (692 aa)
BMF94_5952CASP_C domain-containing protein. (661 aa)
BMF94_5477Uncharacterized protein. (248 aa)
BMF94_5531GOLD domain-containing protein. (204 aa)
BMF94_5580Uncharacterized protein. (1484 aa)
BMF94_5579Sec39 domain-containing protein. (1418 aa)
BMF94_5649Uncharacterized protein. (726 aa)
BMF94_5690WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (341 aa)
BMF94_5750ER lumen protein-retaining receptor. (225 aa)
BMF94_5449Uncharacterized protein. (311 aa)
BMF94_5091GRIP domain-containing protein. (577 aa)
BMF94_5119Rab-GAP TBC domain-containing protein. (806 aa)
BMF94_5128GOLD domain-containing protein. (214 aa)
BMF94_5170Uncharacterized protein. (986 aa)
BMF94_5169GOLD domain-containing protein. (249 aa)
BMF94_5162Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (766 aa)
BMF94_5040Uncharacterized protein. (583 aa)
BMF94_4963Uncharacterized protein. (1569 aa)
BMF94_4989t-SNARE coiled-coil homology domain-containing protein. (400 aa)
BMF94_4905Alkyl transferase; Belongs to the UPP synthase family. (305 aa)
BMF94_4896PX domain-containing protein. (243 aa)
BMF94_4576Uncharacterized protein. (569 aa)
BMF94_4628t-SNARE coiled-coil homology domain-containing protein. (379 aa)
BMF94_4666Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. BET3 subfamily. (260 aa)
BMF94_4657UDENN domain-containing protein. (1013 aa)
BMF94_4690Rab-GAP TBC domain-containing protein. (882 aa)
BMF94_4256t-SNARE coiled-coil homology domain-containing protein. (230 aa)
BMF94_4343Uncharacterized protein. (916 aa)
BMF94_4368Exo84_C domain-containing protein. (819 aa)
BMF94_7078Uncharacterized protein. (867 aa)
BMF94_4422Cog4 domain-containing protein. (797 aa)
BMF94_4408Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. (227 aa)
BMF94_4541Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (985 aa)
BMF94_4227Uncharacterized protein. (738 aa)
BMF94_4004Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (933 aa)
BMF94_3860Uncharacterized protein. (1023 aa)
BMF94_3864Bap31 domain-containing protein. (182 aa)
BMF94_3885Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (638 aa)
BMF94_3907Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. (563 aa)
BMF94_3848Dopey_N domain-containing protein. (1866 aa)
BMF94_3808Uncharacterized protein. (416 aa)
BMF94_3540Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (196 aa)
BMF94_3435Uncharacterized protein. (519 aa)
BMF94_3465t-SNARE coiled-coil homology domain-containing protein. (133 aa)
BMF94_3509Uncharacterized protein. (946 aa)
BMF94_3232Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (940 aa)
BMF94_3320Protein YIP. (268 aa)
BMF94_3355Uncharacterized protein; Belongs to the synaptobrevin family. (300 aa)
BMF94_3371Uncharacterized protein. (382 aa)
BMF94_3352Uncharacterized protein. (487 aa)
BMF94_3026Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment. (196 aa)
BMF94_3054L-type lectin-like domain-containing protein. (373 aa)
BMF94_3074Uncharacterized protein. (393 aa)
BMF94_3084Uncharacterized protein. (612 aa)
BMF94_6984Arf-GAP domain-containing protein. (184 aa)
BMF94_2817Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1666 aa)
BMF94_2931Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. (354 aa)
BMF94_2925Uncharacterized protein. (1156 aa)
BMF94_2947DUF1741 domain-containing protein. (917 aa)
BMF94_2737Uncharacterized protein. (376 aa)
BMF94_2572FYVE-type domain-containing protein. (664 aa)
BMF94_2643Vps54 domain-containing protein. (1825 aa)
BMF94_2391Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family. (2797 aa)
BMF94_2427SEC7 domain-containing protein. (2228 aa)
BMF94_2448Uncharacterized protein. (1210 aa)
BMF94_2433Putative Small monomeric GTPase; Belongs to the small GTPase superfamily. Arf family. (184 aa)
BMF94_2176Uncharacterized protein. (552 aa)
BMF94_2239t-SNARE coiled-coil homology domain-containing protein. (264 aa)
BMF94_2118Uncharacterized protein. (2727 aa)
BMF94_1899Uncharacterized protein. (447 aa)
BMF94_1957Uncharacterized protein. (449 aa)
BMF94_2007Protein YIP. (265 aa)
BMF94_1799Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family. (193 aa)
BMF94_1842Uncharacterized protein. (169 aa)
BMF94_1549Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (717 aa)
BMF94_1486Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events. (751 aa)
BMF94_1189t-SNARE coiled-coil homology domain-containing protein. (286 aa)
BMF94_1285Uncharacterized protein. (1997 aa)
BMF94_1305Uncharacterized protein. (765 aa)
BMF94_1145Uncharacterized protein. (854 aa)
BMF94_1353PRA1 family protein. (165 aa)
BMF94_1183Coatomer subunit alpha; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. (1247 aa)
BMF94_0960t-SNARE coiled-coil homology domain-containing protein. (119 aa)
BMF94_1014Uncharacterized protein. (443 aa)
BMF94_1008MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (437 aa)
BMF94_1015AP-1 complex subunit gamma. (855 aa)
BMF94_0729Uncharacterized protein. (839 aa)
BMF94_0082AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane. (921 aa)
BMF94_0046Lgl_C domain-containing protein. (1208 aa)
BMF94_0288Sec3-PIP2_bind domain-containing protein. (1198 aa)
BMF94_0164Uncharacterized protein. (640 aa)
BMF94_0158Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (141 aa)
BMF94_0656AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (191 aa)
BMF94_0658Uncharacterized protein. (367 aa)
BMF94_0500Uncharacterized protein. (891 aa)
BMF94_0483AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (871 aa)
BMF94_0901Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (721 aa)
BMF94_0866CRAL-TRIO domain-containing protein. (276 aa)
BMF94_0867CRAL-TRIO domain-containing protein. (324 aa)
BMF94_0841Putative Biliverdin reductase; Belongs to the synaptobrevin family. (212 aa)
BMF94_0767Trafficking protein particle complex subunit BET3. (206 aa)
BMF94_0727Uncharacterized protein. (138 aa)
BMF94_7044Uncharacterized protein. (1159 aa)
BMF94_7014Uncharacterized protein. (992 aa)
Your Current Organism:
Rhodotorula taiwanensis
NCBI taxonomy Id: 741276
Other names: A1-01, BCRC 23118, CBS 11729, R. taiwanensis, Rhodotorula sp. BCRC 23118, Rhodotorula taiwanensis Lee & Huang 2011
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