STRINGSTRING
B3C1_16922 B3C1_16922 B3C1_00350 B3C1_00350 B3C1_00370 B3C1_00370 B3C1_06874 B3C1_06874 B3C1_12319 B3C1_12319 B3C1_14922 B3C1_14922 B3C1_17837 B3C1_17837 B3C1_11629 B3C1_11629 B3C1_06288 B3C1_06288 B3C1_04935 B3C1_04935 B3C1_03230 B3C1_03230 B3C1_07616 B3C1_07616 B3C1_12834 B3C1_12834 B3C1_14777 B3C1_14777
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
B3C1_16922PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase; COG2202 FOG: PAS/PAC domain. (628 aa)
B3C1_00350Methyl-accepting chemotaxis sensory transducer; COG2202 FOG: PAS/PAC domain. (516 aa)
B3C1_00370Methyl-accepting chemotaxis sensory transducer; COG2202 FOG: PAS/PAC domain. (517 aa)
B3C1_06874PAS/PAC and GAF sensor-containing diguanylate cyclase; COG2202 FOG: PAS/PAC domain. (716 aa)
B3C1_12319Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); COG2199 FOG: GGDEF domain. (1444 aa)
B3C1_14922Sensory box/GGDEF/GAF/EAL domain protein; COG2202 FOG: PAS/PAC domain. (551 aa)
B3C1_17837PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase; COG2199 FOG: GGDEF domain. (757 aa)
B3C1_11629Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor; COG2202 FOG: PAS/PAC domain. (433 aa)
B3C1_06288Putative MCP-type signal transduction protein; COG2202 FOG: PAS/PAC domain. (444 aa)
B3C1_04935PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase; COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain. (1425 aa)
B3C1_03230Diguanylate cyclase; COG2202 FOG: PAS/PAC domain. (1342 aa)
B3C1_07616Sensory box histidine kinase/response regulator; COG0642 Signal transduction histidine kinase. (1260 aa)
B3C1_12834Bifunctional PAS sensor histidine kinase protein/response regulator; COG2202 FOG: PAS/PAC domain. (829 aa)
B3C1_14777Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor; COG2202 FOG: PAS/PAC domain. (513 aa)
Your Current Organism:
Gallaecimonas xiamenensis
NCBI taxonomy Id: 745411
Other names: G. xiamenensis 3-C-1, Gallaecimonas sp. 3-C-1, Gallaecimonas xiamenensis 3-C-1, Gallaecimonas xiamenensis str. 3-C-1, Gallaecimonas xiamenensis strain 3-C-1
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