STRINGSTRING
ENSSGRP00000000245 ENSSGRP00000000245 LOC107559756 LOC107559756 SF3B2 SF3B2 LOC107575440 LOC107575440 Snrpa1 Snrpa1 LOC107598637 LOC107598637 SF3A3 SF3A3 snrpb snrpb ENSSGRP00000066673 ENSSGRP00000066673 ENSSGRP00000072435 ENSSGRP00000072435 ENSSGRP00000076381 ENSSGRP00000076381 LOC107580725-2 LOC107580725-2 LOC107557830 LOC107557830 LOC107564451 LOC107564451 LOC107600046-2 LOC107600046-2 LOC107595454 LOC107595454
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSSGRP00000000245Splicing factor 3a, subunit 2. (283 aa)
LOC107559756Small nuclear ribonucleoprotein Sm D1-like. (120 aa)
SF3B2Splicing factor 3b subunit 2. (653 aa)
LOC107575440Splicing factor 3A subunit 1-like. (536 aa)
Snrpa1U2 small nuclear ribonucleoprotein A. (98 aa)
LOC107598637Small nuclear ribonucleoprotein G. (76 aa)
SF3A3Splicing factor 3A subunit 3-like. (477 aa)
snrpbSmall nuclear ribonucleoprotein-associated proteins B and B. (247 aa)
ENSSGRP00000066673DEAD (Asp-Glu-Ala-Asp) box polypeptide 46. (911 aa)
ENSSGRP00000072435PHD finger-like domain-containing protein 5A. (142 aa)
ENSSGRP00000076381Small nuclear ribonucleoprotein F-like isoform X1. (87 aa)
LOC107580725-2Small nuclear ribonucleoprotein E. (92 aa)
LOC107557830Small nuclear ribonucleoprotein Sm D2-like. (116 aa)
LOC107564451Splicing factor 3A subunit 1-like. (784 aa)
LOC107600046-2Small nuclear ribonucleoprotein Sm D3-like. (127 aa)
LOC107595454U1 small nuclear ribonucleoprotein C-like. (155 aa)
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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