STRINGSTRING
eftud2 eftud2 LOC107548576 LOC107548576 ENSSGRP00000082485 ENSSGRP00000082485 LOC107593559 LOC107593559 PRPF6 PRPF6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
eftud2116 kDa U5 small nuclear ribonucleoprotein component. (980 aa)
LOC107548576Pre-mRNA-processing-splicing factor 8-like isoform X1. (2342 aa)
ENSSGRP00000082485LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein 200 kDa helicase-like. (2114 aa)
LOC107593559U5 small nuclear ribonucleoprotein 40 kDa protein. (347 aa)
PRPF6Pre-mRNA-processing factor 6 isoform X1. (1014 aa)
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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