(10 nodes) Mixed, incl. Conserved mid region of cactin, and NF-kappa-B-activating protein network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000007458	annotation not available (137 aa)
	LOC107599251	Cactin-like isoform X1. (823 aa)
	ENSSGRP00000022466	annotation not available (74 aa)
	ENSSGRP00000023804	Protein SDE2 homolog. (264 aa)
	LOC107565175	Protein SDE2 homolog isoform X1. (535 aa)
	nkap	NF-kappa-B-activating protein. (375 aa)
	ENSSGRP00000054889	CWC22 spliceosome associated protein homolog. (940 aa)
	LOC107561582	PRKR-interacting protein 1 homolog isoform X1. (180 aa)
	fam32a	Protein FAM32A. (109 aa)
	LOC107600224	Cactin-like. (821 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000007458	ENSSGRP00000022466	ENSSGRP00000007458	ENSSGRP00000022466	annotation not available	annotation not available	0.649
ENSSGRP00000007458	ENSSGRP00000023804	ENSSGRP00000007458	ENSSGRP00000023804	annotation not available	Protein SDE2 homolog.	0.793
ENSSGRP00000007458	ENSSGRP00000054889	ENSSGRP00000007458	ENSSGRP00000054889	annotation not available	CWC22 spliceosome associated protein homolog.	0.944
ENSSGRP00000007458	LOC107561582	ENSSGRP00000007458	ENSSGRP00000058342	annotation not available	PRKR-interacting protein 1 homolog isoform X1.	0.860
ENSSGRP00000007458	LOC107565175	ENSSGRP00000007458	ENSSGRP00000037086	annotation not available	Protein SDE2 homolog isoform X1.	0.793
ENSSGRP00000007458	LOC107599251	ENSSGRP00000007458	ENSSGRP00000017224	annotation not available	Cactin-like isoform X1.	0.789
ENSSGRP00000007458	LOC107600224	ENSSGRP00000007458	ENSSGRP00000105107	annotation not available	Cactin-like.	0.789
ENSSGRP00000007458	fam32a	ENSSGRP00000007458	ENSSGRP00000075360	annotation not available	Protein FAM32A.	0.829
ENSSGRP00000007458	nkap	ENSSGRP00000007458	ENSSGRP00000054533	annotation not available	NF-kappa-B-activating protein.	0.888
ENSSGRP00000022466	ENSSGRP00000007458	ENSSGRP00000022466	ENSSGRP00000007458	annotation not available	annotation not available	0.649
ENSSGRP00000022466	ENSSGRP00000023804	ENSSGRP00000022466	ENSSGRP00000023804	annotation not available	Protein SDE2 homolog.	0.944
ENSSGRP00000022466	ENSSGRP00000054889	ENSSGRP00000022466	ENSSGRP00000054889	annotation not available	CWC22 spliceosome associated protein homolog.	0.989
ENSSGRP00000022466	LOC107561582	ENSSGRP00000022466	ENSSGRP00000058342	annotation not available	PRKR-interacting protein 1 homolog isoform X1.	0.986
ENSSGRP00000022466	LOC107565175	ENSSGRP00000022466	ENSSGRP00000037086	annotation not available	Protein SDE2 homolog isoform X1.	0.944
ENSSGRP00000022466	LOC107599251	ENSSGRP00000022466	ENSSGRP00000017224	annotation not available	Cactin-like isoform X1.	0.674
ENSSGRP00000022466	LOC107600224	ENSSGRP00000022466	ENSSGRP00000105107	annotation not available	Cactin-like.	0.674
ENSSGRP00000022466	nkap	ENSSGRP00000022466	ENSSGRP00000054533	annotation not available	NF-kappa-B-activating protein.	0.978
ENSSGRP00000023804	ENSSGRP00000007458	ENSSGRP00000023804	ENSSGRP00000007458	Protein SDE2 homolog.	annotation not available	0.793
ENSSGRP00000023804	ENSSGRP00000022466	ENSSGRP00000023804	ENSSGRP00000022466	Protein SDE2 homolog.	annotation not available	0.944
ENSSGRP00000023804	ENSSGRP00000054889	ENSSGRP00000023804	ENSSGRP00000054889	Protein SDE2 homolog.	CWC22 spliceosome associated protein homolog.	0.901