(13 nodes) Barrier to autointegration factor, and Nuclear pore localization network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	lemd3	Inner nuclear membrane protein Man1. (844 aa)
	ENSSGRP00000004801	Lamin-L(II)-like. (84 aa)
	LOC107579078	Barrier-to-autointegration factor-like. (90 aa)
	ENSSGRP00000029842	Lamin-B2-like. (563 aa)
	LOC107551414	Lamina-associated polypeptide 2-like isoform X1. (366 aa)
	LOC107560939	Emerin-like. (190 aa)
	LOC107570273	Emerin-like. (190 aa)
	ENSSGRP00000061920	Si:dkey-211g8.4. (99 aa)
	ENSSGRP00000061923	Si:dkey-211g8.4. (97 aa)
	ENSSGRP00000086438	LEM domain containing 3. (781 aa)
	LOC107598000	Lamin-A-like. (673 aa)
	ENSSGRP00000102890	Lamin-B2-like. (631 aa)
	LOC107548237	Barrier-to-autointegration factor. (90 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000004801	ENSSGRP00000061920	ENSSGRP00000004801	ENSSGRP00000061920	Lamin-L(II)-like.	Si:dkey-211g8.4.	0.794
ENSSGRP00000004801	ENSSGRP00000061923	ENSSGRP00000004801	ENSSGRP00000061923	Lamin-L(II)-like.	Si:dkey-211g8.4.	0.794
ENSSGRP00000004801	ENSSGRP00000086438	ENSSGRP00000004801	ENSSGRP00000086438	Lamin-L(II)-like.	LEM domain containing 3.	0.749
ENSSGRP00000004801	LOC107548237	ENSSGRP00000004801	ENSSGRP00000106432	Lamin-L(II)-like.	Barrier-to-autointegration factor.	0.817
ENSSGRP00000004801	LOC107551414	ENSSGRP00000004801	ENSSGRP00000044299	Lamin-L(II)-like.	Lamina-associated polypeptide 2-like isoform X1.	0.636
ENSSGRP00000004801	LOC107560939	ENSSGRP00000004801	ENSSGRP00000049455	Lamin-L(II)-like.	Emerin-like.	0.798
ENSSGRP00000004801	LOC107570273	ENSSGRP00000004801	ENSSGRP00000050953	Lamin-L(II)-like.	Emerin-like.	0.798
ENSSGRP00000004801	LOC107579078	ENSSGRP00000004801	ENSSGRP00000009475	Lamin-L(II)-like.	Barrier-to-autointegration factor-like.	0.817
ENSSGRP00000004801	lemd3	ENSSGRP00000004801	ENSSGRP00000000907	Lamin-L(II)-like.	Inner nuclear membrane protein Man1.	0.749
ENSSGRP00000029842	ENSSGRP00000061920	ENSSGRP00000029842	ENSSGRP00000061920	Lamin-B2-like.	Si:dkey-211g8.4.	0.794
ENSSGRP00000029842	ENSSGRP00000061923	ENSSGRP00000029842	ENSSGRP00000061923	Lamin-B2-like.	Si:dkey-211g8.4.	0.794
ENSSGRP00000029842	ENSSGRP00000086438	ENSSGRP00000029842	ENSSGRP00000086438	Lamin-B2-like.	LEM domain containing 3.	0.749
ENSSGRP00000029842	LOC107548237	ENSSGRP00000029842	ENSSGRP00000106432	Lamin-B2-like.	Barrier-to-autointegration factor.	0.817
ENSSGRP00000029842	LOC107551414	ENSSGRP00000029842	ENSSGRP00000044299	Lamin-B2-like.	Lamina-associated polypeptide 2-like isoform X1.	0.636
ENSSGRP00000029842	LOC107560939	ENSSGRP00000029842	ENSSGRP00000049455	Lamin-B2-like.	Emerin-like.	0.798
ENSSGRP00000029842	LOC107570273	ENSSGRP00000029842	ENSSGRP00000050953	Lamin-B2-like.	Emerin-like.	0.798
ENSSGRP00000029842	LOC107579078	ENSSGRP00000029842	ENSSGRP00000009475	Lamin-B2-like.	Barrier-to-autointegration factor-like.	0.817
ENSSGRP00000029842	lemd3	ENSSGRP00000029842	ENSSGRP00000000907	Lamin-B2-like.	Inner nuclear membrane protein Man1.	0.749
ENSSGRP00000061920	ENSSGRP00000004801	ENSSGRP00000061920	ENSSGRP00000004801	Si:dkey-211g8.4.	Lamin-L(II)-like.	0.794
ENSSGRP00000061920	ENSSGRP00000029842	ENSSGRP00000061920	ENSSGRP00000029842	Si:dkey-211g8.4.	Lamin-B2-like.	0.794