(6 nodes) Mixed, incl. Establishment or maintenance of polarity of embryonic epithelium, and L27_2 network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107585377	Protein crumbs homolog 2-like isoform X1. (1458 aa)
	ENSSGRP00000071106	PATJ crumbs cell polarity complex component. (1609 aa)
	CRB2	Protein crumbs homolog 2-like. (1422 aa)
	ENSSGRP00000104629	annotation not available (179 aa)
	ENSSGRP00000104632	annotation not available (121 aa)
	ENSSGRP00000112545	annotation not available (1576 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CRB2	ENSSGRP00000071106	ENSSGRP00000103987	ENSSGRP00000071106	Protein crumbs homolog 2-like.	PATJ crumbs cell polarity complex component.	0.614
CRB2	ENSSGRP00000104629	ENSSGRP00000103987	ENSSGRP00000104629	Protein crumbs homolog 2-like.	annotation not available	0.746
CRB2	ENSSGRP00000104632	ENSSGRP00000103987	ENSSGRP00000104632	Protein crumbs homolog 2-like.	annotation not available	0.746
CRB2	ENSSGRP00000112545	ENSSGRP00000103987	ENSSGRP00000112545	Protein crumbs homolog 2-like.	annotation not available	0.614
ENSSGRP00000071106	CRB2	ENSSGRP00000071106	ENSSGRP00000103987	PATJ crumbs cell polarity complex component.	Protein crumbs homolog 2-like.	0.614
ENSSGRP00000071106	ENSSGRP00000104629	ENSSGRP00000071106	ENSSGRP00000104629	PATJ crumbs cell polarity complex component.	annotation not available	0.736
ENSSGRP00000071106	ENSSGRP00000104632	ENSSGRP00000071106	ENSSGRP00000104632	PATJ crumbs cell polarity complex component.	annotation not available	0.736
ENSSGRP00000071106	LOC107585377	ENSSGRP00000071106	ENSSGRP00000059064	PATJ crumbs cell polarity complex component.	Protein crumbs homolog 2-like isoform X1.	0.614
ENSSGRP00000104629	CRB2	ENSSGRP00000104629	ENSSGRP00000103987	annotation not available	Protein crumbs homolog 2-like.	0.746
ENSSGRP00000104629	ENSSGRP00000071106	ENSSGRP00000104629	ENSSGRP00000071106	annotation not available	PATJ crumbs cell polarity complex component.	0.736
ENSSGRP00000104629	ENSSGRP00000112545	ENSSGRP00000104629	ENSSGRP00000112545	annotation not available	annotation not available	0.736
ENSSGRP00000104629	LOC107585377	ENSSGRP00000104629	ENSSGRP00000059064	annotation not available	Protein crumbs homolog 2-like isoform X1.	0.746
ENSSGRP00000104632	CRB2	ENSSGRP00000104632	ENSSGRP00000103987	annotation not available	Protein crumbs homolog 2-like.	0.746
ENSSGRP00000104632	ENSSGRP00000071106	ENSSGRP00000104632	ENSSGRP00000071106	annotation not available	PATJ crumbs cell polarity complex component.	0.736
ENSSGRP00000104632	ENSSGRP00000112545	ENSSGRP00000104632	ENSSGRP00000112545	annotation not available	annotation not available	0.736
ENSSGRP00000104632	LOC107585377	ENSSGRP00000104632	ENSSGRP00000059064	annotation not available	Protein crumbs homolog 2-like isoform X1.	0.746
ENSSGRP00000112545	CRB2	ENSSGRP00000112545	ENSSGRP00000103987	annotation not available	Protein crumbs homolog 2-like.	0.614
ENSSGRP00000112545	ENSSGRP00000104629	ENSSGRP00000112545	ENSSGRP00000104629	annotation not available	annotation not available	0.736
ENSSGRP00000112545	ENSSGRP00000104632	ENSSGRP00000112545	ENSSGRP00000104632	annotation not available	annotation not available	0.736
ENSSGRP00000112545	LOC107585377	ENSSGRP00000112545	ENSSGRP00000059064	annotation not available	Protein crumbs homolog 2-like isoform X1.	0.614