(6 nodes) Inflammasome, and Disaccharide binding network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107592160	Caspase-1-like. (391 aa)
	ENSSGRP00000028031	Natterin-like protein. (209 aa)
	ENSSGRP00000028040	Natterin-like protein. (232 aa)
	ENSSGRP00000030265	Natterin-like protein. (217 aa)
	LOC107574341	Caspase-1-like. (452 aa)
	ENSSGRP00000034416	Caspase-1-like. (393 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000028031	ENSSGRP00000034416	ENSSGRP00000028031	ENSSGRP00000034416	Natterin-like protein.	Caspase-1-like.	0.849
ENSSGRP00000028031	LOC107574341	ENSSGRP00000028031	ENSSGRP00000030612	Natterin-like protein.	Caspase-1-like.	0.849
ENSSGRP00000028031	LOC107592160	ENSSGRP00000028031	ENSSGRP00000011953	Natterin-like protein.	Caspase-1-like.	0.849
ENSSGRP00000028040	ENSSGRP00000034416	ENSSGRP00000028040	ENSSGRP00000034416	Natterin-like protein.	Caspase-1-like.	0.849
ENSSGRP00000028040	LOC107574341	ENSSGRP00000028040	ENSSGRP00000030612	Natterin-like protein.	Caspase-1-like.	0.849
ENSSGRP00000028040	LOC107592160	ENSSGRP00000028040	ENSSGRP00000011953	Natterin-like protein.	Caspase-1-like.	0.849
ENSSGRP00000030265	ENSSGRP00000034416	ENSSGRP00000030265	ENSSGRP00000034416	Natterin-like protein.	Caspase-1-like.	0.849
ENSSGRP00000030265	LOC107574341	ENSSGRP00000030265	ENSSGRP00000030612	Natterin-like protein.	Caspase-1-like.	0.849
ENSSGRP00000030265	LOC107592160	ENSSGRP00000030265	ENSSGRP00000011953	Natterin-like protein.	Caspase-1-like.	0.849
ENSSGRP00000034416	ENSSGRP00000028031	ENSSGRP00000034416	ENSSGRP00000028031	Caspase-1-like.	Natterin-like protein.	0.849
ENSSGRP00000034416	ENSSGRP00000028040	ENSSGRP00000034416	ENSSGRP00000028040	Caspase-1-like.	Natterin-like protein.	0.849
ENSSGRP00000034416	ENSSGRP00000030265	ENSSGRP00000034416	ENSSGRP00000030265	Caspase-1-like.	Natterin-like protein.	0.849
LOC107574341	ENSSGRP00000028031	ENSSGRP00000030612	ENSSGRP00000028031	Caspase-1-like.	Natterin-like protein.	0.849
LOC107574341	ENSSGRP00000028040	ENSSGRP00000030612	ENSSGRP00000028040	Caspase-1-like.	Natterin-like protein.	0.849
LOC107574341	ENSSGRP00000030265	ENSSGRP00000030612	ENSSGRP00000030265	Caspase-1-like.	Natterin-like protein.	0.849
LOC107592160	ENSSGRP00000028031	ENSSGRP00000011953	ENSSGRP00000028031	Caspase-1-like.	Natterin-like protein.	0.849
LOC107592160	ENSSGRP00000028040	ENSSGRP00000011953	ENSSGRP00000028040	Caspase-1-like.	Natterin-like protein.	0.849
LOC107592160	ENSSGRP00000030265	ENSSGRP00000011953	ENSSGRP00000030265	Caspase-1-like.	Natterin-like protein.	0.849