(28 nodes) Trypsin-like serine protease network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000006141	annotation not available (127 aa)
	ENSSGRP00000007776	annotation not available (121 aa)
	LOC107571700	Plasma kallikrein-like isoform X1. (292 aa)
	ENSSGRP00000021558	Chymotrypsin A-like. (245 aa)
	ENSSGRP00000022406	Si:dkey-78l4.7. (268 aa)
	ENSSGRP00000022543	annotation not available (225 aa)
	ENSSGRP00000026726	annotation not available (184 aa)
	ENSSGRP00000027345	Zgc:136461. (214 aa)
	LOC107575023	Granzyme K-like. (257 aa)
	ENSSGRP00000032965	annotation not available (156 aa)
	f10	Coagulation factor X. (505 aa)
	ENSSGRP00000042517	annotation not available (116 aa)
	ENSSGRP00000050411	Polyserase-2-like. (407 aa)
	ENSSGRP00000050911	annotation not available (69 aa)
	ENSSGRP00000051367	Si:dkey-21e2.3. (252 aa)
	ENSSGRP00000051370	annotation not available (121 aa)
	ENSSGRP00000052002	Elastase 2. (292 aa)
	ENSSGRP00000052375	annotation not available (140 aa)
	LOC107586452	Mast cell protease 1A-like. (254 aa)
	LOC107599477	Chymase-like. (250 aa)
	ENSSGRP00000061696	Coagulation factor IXa. (500 aa)
	ENSSGRP00000066693	Coagulation factor III (tissue factor). (293 aa)
	ENSSGRP00000085407	annotation not available (76 aa)
	ENSSGRP00000093018	annotation not available (307 aa)
	LOC107602164	Tissue factor pathway inhibitor-like isoform X1. (285 aa)
	ENSSGRP00000100473	annotation not available (177 aa)
	ENSSGRP00000101699	Si:ch211-212d10.1. (262 aa)
	ENSSGRP00000111468	Coagulation factor IXa. (173 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000006141	ENSSGRP00000021558	ENSSGRP00000006141	ENSSGRP00000021558	annotation not available	Chymotrypsin A-like.	0.429
ENSSGRP00000006141	ENSSGRP00000022406	ENSSGRP00000006141	ENSSGRP00000022406	annotation not available	Si:dkey-78l4.7.	0.523
ENSSGRP00000006141	ENSSGRP00000022543	ENSSGRP00000006141	ENSSGRP00000022543	annotation not available	annotation not available	0.524
ENSSGRP00000006141	ENSSGRP00000026726	ENSSGRP00000006141	ENSSGRP00000026726	annotation not available	annotation not available	0.680
ENSSGRP00000006141	ENSSGRP00000027345	ENSSGRP00000006141	ENSSGRP00000027345	annotation not available	Zgc:136461.	0.595
ENSSGRP00000006141	ENSSGRP00000032965	ENSSGRP00000006141	ENSSGRP00000032965	annotation not available	annotation not available	0.535
ENSSGRP00000006141	ENSSGRP00000042517	ENSSGRP00000006141	ENSSGRP00000042517	annotation not available	annotation not available	0.573
ENSSGRP00000006141	ENSSGRP00000050911	ENSSGRP00000006141	ENSSGRP00000050911	annotation not available	annotation not available	0.498
ENSSGRP00000006141	ENSSGRP00000051367	ENSSGRP00000006141	ENSSGRP00000051367	annotation not available	Si:dkey-21e2.3.	0.524
ENSSGRP00000006141	ENSSGRP00000051370	ENSSGRP00000006141	ENSSGRP00000051370	annotation not available	annotation not available	0.477
ENSSGRP00000006141	ENSSGRP00000052002	ENSSGRP00000006141	ENSSGRP00000052002	annotation not available	Elastase 2.	0.583
ENSSGRP00000006141	ENSSGRP00000052375	ENSSGRP00000006141	ENSSGRP00000052375	annotation not available	annotation not available	0.537
ENSSGRP00000006141	ENSSGRP00000085407	ENSSGRP00000006141	ENSSGRP00000085407	annotation not available	annotation not available	0.425
ENSSGRP00000006141	ENSSGRP00000100473	ENSSGRP00000006141	ENSSGRP00000100473	annotation not available	annotation not available	0.551
ENSSGRP00000006141	ENSSGRP00000101699	ENSSGRP00000006141	ENSSGRP00000101699	annotation not available	Si:ch211-212d10.1.	0.497
ENSSGRP00000006141	LOC107575023	ENSSGRP00000006141	ENSSGRP00000028824	annotation not available	Granzyme K-like.	0.517
ENSSGRP00000006141	LOC107586452	ENSSGRP00000006141	ENSSGRP00000052617	annotation not available	Mast cell protease 1A-like.	0.522
ENSSGRP00000006141	LOC107599477	ENSSGRP00000006141	ENSSGRP00000057220	annotation not available	Chymase-like.	0.517
ENSSGRP00000006141	LOC107602164	ENSSGRP00000006141	ENSSGRP00000094552	annotation not available	Tissue factor pathway inhibitor-like isoform X1.	0.428
ENSSGRP00000007776	ENSSGRP00000021558	ENSSGRP00000007776	ENSSGRP00000021558	annotation not available	Chymotrypsin A-like.	0.596