(11 nodes) Elongin complex, and Cul5-RING ubiquitin ligase complex network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107569299	Von Hippel-Lindau disease tumor suppressor-like. (162 aa)
	LOC107583061	Transcription elongation factor B polypeptide 2-like. (119 aa)
	LOC107560250	Transcription elongation factor B polypeptide 1-like. (112 aa)
	LOC107551625	Cullin-5-like. (838 aa)
	LOC107563517	RING-box protein 2-like. (113 aa)
	LOC107572540	Transcription elongation factor B polypeptide 2. (113 aa)
	LOC107557824	RING-box protein 2. (113 aa)
	ENSSGRP00000079993	Cullin 2. (704 aa)
	ENSSGRP00000092179	Cullin-5-like. (786 aa)
	LOC107579835-2	NEDD8-like. (91 aa)
	LOC107550711-2	Transcription elongation factor B polypeptide 1. (112 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000079993	ENSSGRP00000092179	ENSSGRP00000079993	ENSSGRP00000092179	Cullin 2.	Cullin-5-like.	0.794
ENSSGRP00000079993	LOC107550711-2	ENSSGRP00000079993	ENSSGRP00000107078	Cullin 2.	Transcription elongation factor B polypeptide 1.	0.982
ENSSGRP00000079993	LOC107551625	ENSSGRP00000079993	ENSSGRP00000021744	Cullin 2.	Cullin-5-like.	0.794
ENSSGRP00000079993	LOC107557824	ENSSGRP00000079993	ENSSGRP00000079409	Cullin 2.	RING-box protein 2.	0.972
ENSSGRP00000079993	LOC107560250	ENSSGRP00000079993	ENSSGRP00000021612	Cullin 2.	Transcription elongation factor B polypeptide 1-like.	0.982
ENSSGRP00000079993	LOC107563517	ENSSGRP00000079993	ENSSGRP00000036206	Cullin 2.	RING-box protein 2-like.	0.972
ENSSGRP00000079993	LOC107569299	ENSSGRP00000079993	ENSSGRP00000000936	Cullin 2.	Von Hippel-Lindau disease tumor suppressor-like.	0.982
ENSSGRP00000079993	LOC107572540	ENSSGRP00000079993	ENSSGRP00000049125	Cullin 2.	Transcription elongation factor B polypeptide 2.	0.981
ENSSGRP00000079993	LOC107579835-2	ENSSGRP00000079993	ENSSGRP00000094810	Cullin 2.	NEDD8-like.	0.951
ENSSGRP00000079993	LOC107583061	ENSSGRP00000079993	ENSSGRP00000002683	Cullin 2.	Transcription elongation factor B polypeptide 2-like.	0.981
ENSSGRP00000092179	ENSSGRP00000079993	ENSSGRP00000092179	ENSSGRP00000079993	Cullin-5-like.	Cullin 2.	0.794
ENSSGRP00000092179	LOC107550711-2	ENSSGRP00000092179	ENSSGRP00000107078	Cullin-5-like.	Transcription elongation factor B polypeptide 1.	0.955
ENSSGRP00000092179	LOC107551625	ENSSGRP00000092179	ENSSGRP00000021744	Cullin-5-like.	Cullin-5-like.	0.900
ENSSGRP00000092179	LOC107557824	ENSSGRP00000092179	ENSSGRP00000079409	Cullin-5-like.	RING-box protein 2.	0.975
ENSSGRP00000092179	LOC107560250	ENSSGRP00000092179	ENSSGRP00000021612	Cullin-5-like.	Transcription elongation factor B polypeptide 1-like.	0.955
ENSSGRP00000092179	LOC107563517	ENSSGRP00000092179	ENSSGRP00000036206	Cullin-5-like.	RING-box protein 2-like.	0.975
ENSSGRP00000092179	LOC107569299	ENSSGRP00000092179	ENSSGRP00000000936	Cullin-5-like.	Von Hippel-Lindau disease tumor suppressor-like.	0.593
ENSSGRP00000092179	LOC107572540	ENSSGRP00000092179	ENSSGRP00000049125	Cullin-5-like.	Transcription elongation factor B polypeptide 2.	0.953
ENSSGRP00000092179	LOC107579835-2	ENSSGRP00000092179	ENSSGRP00000094810	Cullin-5-like.	NEDD8-like.	0.907
ENSSGRP00000092179	LOC107583061	ENSSGRP00000092179	ENSSGRP00000002683	Cullin-5-like.	Transcription elongation factor B polypeptide 2-like.	0.953