(11 nodes) Photoreactive repair, and CLOCK-BMAL transcription complex network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107593424	Cryptochrome-1-like. (627 aa)
	LOC107560722	Cryptochrome-1-like. (621 aa)
	ENSSGRP00000012847	Clock circadian regulator a. (755 aa)
	ENSSGRP00000034198	Cryptochrome circadian regulator 3a. (661 aa)
	ENSSGRP00000040465	Circadian locomoter output cycles protein kaput-like. (342 aa)
	ENSSGRP00000056673	Aryl hydrocarbon receptor nuclear translocator-like 1b. (517 aa)
	ENSSGRP00000069314	Period circadian protein homolog 2-like isoform X1. (1388 aa)
	LOC107583820	Aryl hydrocarbon receptor nuclear translocator-like protein 2 isoform X1. (635 aa)
	ENSSGRP00000082587	Cryptochrome DASH. (424 aa)
	LOC107596478	Period circadian protein homolog 1-like isoform X1. (1400 aa)
	LOC107557521	Period circadian protein homolog 1-like isoform X1. (1413 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000012847	ENSSGRP00000034198	ENSSGRP00000012847	ENSSGRP00000034198	Clock circadian regulator a.	Cryptochrome circadian regulator 3a.	0.800
ENSSGRP00000012847	ENSSGRP00000056673	ENSSGRP00000012847	ENSSGRP00000056673	Clock circadian regulator a.	Aryl hydrocarbon receptor nuclear translocator-like 1b.	0.839
ENSSGRP00000012847	ENSSGRP00000069314	ENSSGRP00000012847	ENSSGRP00000069314	Clock circadian regulator a.	Period circadian protein homolog 2-like isoform X1.	0.677
ENSSGRP00000012847	ENSSGRP00000082587	ENSSGRP00000012847	ENSSGRP00000082587	Clock circadian regulator a.	Cryptochrome DASH.	0.637
ENSSGRP00000012847	LOC107557521	ENSSGRP00000012847	ENSSGRP00000110173	Clock circadian regulator a.	Period circadian protein homolog 1-like isoform X1.	0.681
ENSSGRP00000012847	LOC107560722	ENSSGRP00000012847	ENSSGRP00000008494	Clock circadian regulator a.	Cryptochrome-1-like.	0.769
ENSSGRP00000012847	LOC107583820	ENSSGRP00000012847	ENSSGRP00000076545	Clock circadian regulator a.	Aryl hydrocarbon receptor nuclear translocator-like protein 2 isoform X1.	0.839
ENSSGRP00000012847	LOC107593424	ENSSGRP00000012847	ENSSGRP00000000096	Clock circadian regulator a.	Cryptochrome-1-like.	0.769
ENSSGRP00000012847	LOC107596478	ENSSGRP00000012847	ENSSGRP00000109487	Clock circadian regulator a.	Period circadian protein homolog 1-like isoform X1.	0.681
ENSSGRP00000034198	ENSSGRP00000012847	ENSSGRP00000034198	ENSSGRP00000012847	Cryptochrome circadian regulator 3a.	Clock circadian regulator a.	0.800
ENSSGRP00000034198	ENSSGRP00000040465	ENSSGRP00000034198	ENSSGRP00000040465	Cryptochrome circadian regulator 3a.	Circadian locomoter output cycles protein kaput-like.	0.800
ENSSGRP00000034198	ENSSGRP00000056673	ENSSGRP00000034198	ENSSGRP00000056673	Cryptochrome circadian regulator 3a.	Aryl hydrocarbon receptor nuclear translocator-like 1b.	0.843
ENSSGRP00000034198	ENSSGRP00000069314	ENSSGRP00000034198	ENSSGRP00000069314	Cryptochrome circadian regulator 3a.	Period circadian protein homolog 2-like isoform X1.	0.833
ENSSGRP00000034198	LOC107557521	ENSSGRP00000034198	ENSSGRP00000110173	Cryptochrome circadian regulator 3a.	Period circadian protein homolog 1-like isoform X1.	0.842
ENSSGRP00000034198	LOC107583820	ENSSGRP00000034198	ENSSGRP00000076545	Cryptochrome circadian regulator 3a.	Aryl hydrocarbon receptor nuclear translocator-like protein 2 isoform X1.	0.850
ENSSGRP00000034198	LOC107596478	ENSSGRP00000034198	ENSSGRP00000109487	Cryptochrome circadian regulator 3a.	Period circadian protein homolog 1-like isoform X1.	0.842
ENSSGRP00000040465	ENSSGRP00000034198	ENSSGRP00000040465	ENSSGRP00000034198	Circadian locomoter output cycles protein kaput-like.	Cryptochrome circadian regulator 3a.	0.800
ENSSGRP00000040465	ENSSGRP00000056673	ENSSGRP00000040465	ENSSGRP00000056673	Circadian locomoter output cycles protein kaput-like.	Aryl hydrocarbon receptor nuclear translocator-like 1b.	0.839
ENSSGRP00000040465	ENSSGRP00000069314	ENSSGRP00000040465	ENSSGRP00000069314	Circadian locomoter output cycles protein kaput-like.	Period circadian protein homolog 2-like isoform X1.	0.677
ENSSGRP00000040465	ENSSGRP00000082587	ENSSGRP00000040465	ENSSGRP00000082587	Circadian locomoter output cycles protein kaput-like.	Cryptochrome DASH.	0.637