(15 nodes) Mixed, incl. Zinc-finger, and Cellularization cleavage furrow network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000011308	Si:ch211-248l17.3. (622 aa)
	ENSSGRP00000011318	Meteorin-like. (280 aa)
	ENSSGRP00000012595	Protein FAM179B-like isoform X1. (442 aa)
	klhdc8b	Kelch domain-containing protein 8B. (260 aa)
	ENSSGRP00000032430	annotation not available (418 aa)
	LOC107589538	Brorin-like. (316 aa)
	ENSSGRP00000035978	Uncharacterized protein C7orf72-like. (172 aa)
	ENSSGRP00000043046	Si:ch211-248l17.3. (510 aa)
	ENSSGRP00000043047	Meteorin-like. (269 aa)
	LOC107556674	Transmembrane protein 204-like. (226 aa)
	ENSSGRP00000046881	Kelch domain containing 8B. (271 aa)
	KCNG3	Potassium voltage-gated channel modifier subfamily G member 3. (432 aa)
	ENSSGRP00000082355	Brorin-like. (287 aa)
	LOC107594843	Extracellular tyrosine-protein kinase PKDCC&#160. (470 aa)
	KCNG3-2	Potassium voltage-gated channel subfamily G member 3-like isoform X1. (428 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000011308	ENSSGRP00000012595	ENSSGRP00000011308	ENSSGRP00000012595	Si:ch211-248l17.3.	Protein FAM179B-like isoform X1.	0.609
ENSSGRP00000011308	ENSSGRP00000032430	ENSSGRP00000011308	ENSSGRP00000032430	Si:ch211-248l17.3.	annotation not available	0.609
ENSSGRP00000011308	ENSSGRP00000035978	ENSSGRP00000011308	ENSSGRP00000035978	Si:ch211-248l17.3.	Uncharacterized protein C7orf72-like.	0.634
ENSSGRP00000011308	ENSSGRP00000043047	ENSSGRP00000011308	ENSSGRP00000043047	Si:ch211-248l17.3.	Meteorin-like.	0.629
ENSSGRP00000011308	ENSSGRP00000046881	ENSSGRP00000011308	ENSSGRP00000046881	Si:ch211-248l17.3.	Kelch domain containing 8B.	0.585
ENSSGRP00000011308	ENSSGRP00000082355	ENSSGRP00000011308	ENSSGRP00000082355	Si:ch211-248l17.3.	Brorin-like.	0.483
ENSSGRP00000011308	KCNG3	ENSSGRP00000011308	ENSSGRP00000072832	Si:ch211-248l17.3.	Potassium voltage-gated channel modifier subfamily G member 3.	0.620
ENSSGRP00000011308	KCNG3-2	ENSSGRP00000011308	ENSSGRP00000111322	Si:ch211-248l17.3.	Potassium voltage-gated channel subfamily G member 3-like isoform X1.	0.620
ENSSGRP00000011308	LOC107589538	ENSSGRP00000011308	ENSSGRP00000035977	Si:ch211-248l17.3.	Brorin-like.	0.483
ENSSGRP00000011308	klhdc8b	ENSSGRP00000011308	ENSSGRP00000019908	Si:ch211-248l17.3.	Kelch domain-containing protein 8B.	0.585
ENSSGRP00000011318	KCNG3	ENSSGRP00000011318	ENSSGRP00000072832	Meteorin-like.	Potassium voltage-gated channel modifier subfamily G member 3.	0.446
ENSSGRP00000011318	KCNG3-2	ENSSGRP00000011318	ENSSGRP00000111322	Meteorin-like.	Potassium voltage-gated channel subfamily G member 3-like isoform X1.	0.446
ENSSGRP00000011318	LOC107556674	ENSSGRP00000011318	ENSSGRP00000043158	Meteorin-like.	Transmembrane protein 204-like.	0.479
ENSSGRP00000012595	ENSSGRP00000011308	ENSSGRP00000012595	ENSSGRP00000011308	Protein FAM179B-like isoform X1.	Si:ch211-248l17.3.	0.609
ENSSGRP00000012595	ENSSGRP00000035978	ENSSGRP00000012595	ENSSGRP00000035978	Protein FAM179B-like isoform X1.	Uncharacterized protein C7orf72-like.	0.630
ENSSGRP00000012595	ENSSGRP00000043046	ENSSGRP00000012595	ENSSGRP00000043046	Protein FAM179B-like isoform X1.	Si:ch211-248l17.3.	0.609
ENSSGRP00000012595	ENSSGRP00000043047	ENSSGRP00000012595	ENSSGRP00000043047	Protein FAM179B-like isoform X1.	Meteorin-like.	0.450
ENSSGRP00000012595	ENSSGRP00000046881	ENSSGRP00000012595	ENSSGRP00000046881	Protein FAM179B-like isoform X1.	Kelch domain containing 8B.	0.592
ENSSGRP00000012595	KCNG3	ENSSGRP00000012595	ENSSGRP00000072832	Protein FAM179B-like isoform X1.	Potassium voltage-gated channel modifier subfamily G member 3.	0.525
ENSSGRP00000012595	KCNG3-2	ENSSGRP00000012595	ENSSGRP00000111322	Protein FAM179B-like isoform X1.	Potassium voltage-gated channel subfamily G member 3-like isoform X1.	0.525