(11 nodes) Mostly uncharacterized, incl. MAPK1 (ERK2) activation, and B-box zinc finger network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107586783	Uncharacterized protein LOC107586783. (545 aa)
	ENSSGRP00000016601	E3 ubiquitin-protein ligase TRIM39-like. (557 aa)
	ENSSGRP00000027762	annotation not available (162 aa)
	ENSSGRP00000027763	Si:ch1073-406l10.2. (177 aa)
	ENSSGRP00000033355	annotation not available (176 aa)
	ENSSGRP00000033863	annotation not available (50 aa)
	ENSSGRP00000046105	annotation not available (116 aa)
	LOC107594870	Saxitoxin and tetrodotoxin-binding protein 1-like. (202 aa)
	ENSSGRP00000090700	Zgc:195173. (164 aa)
	ENSSGRP00000091553	Uncharacterized protein LOC107594346. (177 aa)
	LOC107551997	OX-2 membrane glycoprotein-like. (388 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000016601	ENSSGRP00000027762	ENSSGRP00000016601	ENSSGRP00000027762	E3 ubiquitin-protein ligase TRIM39-like.	annotation not available	0.489
ENSSGRP00000016601	ENSSGRP00000027763	ENSSGRP00000016601	ENSSGRP00000027763	E3 ubiquitin-protein ligase TRIM39-like.	Si:ch1073-406l10.2.	0.489
ENSSGRP00000016601	ENSSGRP00000033355	ENSSGRP00000016601	ENSSGRP00000033355	E3 ubiquitin-protein ligase TRIM39-like.	annotation not available	0.456
ENSSGRP00000016601	ENSSGRP00000033863	ENSSGRP00000016601	ENSSGRP00000033863	E3 ubiquitin-protein ligase TRIM39-like.	annotation not available	0.521
ENSSGRP00000016601	ENSSGRP00000046105	ENSSGRP00000016601	ENSSGRP00000046105	E3 ubiquitin-protein ligase TRIM39-like.	annotation not available	0.435
ENSSGRP00000016601	ENSSGRP00000090700	ENSSGRP00000016601	ENSSGRP00000090700	E3 ubiquitin-protein ligase TRIM39-like.	Zgc:195173.	0.483
ENSSGRP00000016601	ENSSGRP00000091553	ENSSGRP00000016601	ENSSGRP00000091553	E3 ubiquitin-protein ligase TRIM39-like.	Uncharacterized protein LOC107594346.	0.439
ENSSGRP00000016601	LOC107551997	ENSSGRP00000016601	ENSSGRP00000112606	E3 ubiquitin-protein ligase TRIM39-like.	OX-2 membrane glycoprotein-like.	0.479
ENSSGRP00000016601	LOC107586783	ENSSGRP00000016601	ENSSGRP00000001944	E3 ubiquitin-protein ligase TRIM39-like.	Uncharacterized protein LOC107586783.	0.447
ENSSGRP00000027762	ENSSGRP00000016601	ENSSGRP00000027762	ENSSGRP00000016601	annotation not available	E3 ubiquitin-protein ligase TRIM39-like.	0.489
ENSSGRP00000027762	ENSSGRP00000033355	ENSSGRP00000027762	ENSSGRP00000033355	annotation not available	annotation not available	0.495
ENSSGRP00000027762	ENSSGRP00000033863	ENSSGRP00000027762	ENSSGRP00000033863	annotation not available	annotation not available	0.534
ENSSGRP00000027762	ENSSGRP00000046105	ENSSGRP00000027762	ENSSGRP00000046105	annotation not available	annotation not available	0.494
ENSSGRP00000027762	ENSSGRP00000091553	ENSSGRP00000027762	ENSSGRP00000091553	annotation not available	Uncharacterized protein LOC107594346.	0.462
ENSSGRP00000027762	LOC107551997	ENSSGRP00000027762	ENSSGRP00000112606	annotation not available	OX-2 membrane glycoprotein-like.	0.461
ENSSGRP00000027762	LOC107586783	ENSSGRP00000027762	ENSSGRP00000001944	annotation not available	Uncharacterized protein LOC107586783.	0.503
ENSSGRP00000027762	LOC107594870	ENSSGRP00000027762	ENSSGRP00000089359	annotation not available	Saxitoxin and tetrodotoxin-binding protein 1-like.	0.468
ENSSGRP00000027763	ENSSGRP00000016601	ENSSGRP00000027763	ENSSGRP00000016601	Si:ch1073-406l10.2.	E3 ubiquitin-protein ligase TRIM39-like.	0.489
ENSSGRP00000027763	ENSSGRP00000033355	ENSSGRP00000027763	ENSSGRP00000033355	Si:ch1073-406l10.2.	annotation not available	0.497
ENSSGRP00000027763	ENSSGRP00000033863	ENSSGRP00000027763	ENSSGRP00000033863	Si:ch1073-406l10.2.	annotation not available	0.527