(5 nodes) Mixed, incl. MAPK1 (ERK2) activation network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000027762	annotation not available (162 aa)
	ENSSGRP00000033355	annotation not available (176 aa)
	ENSSGRP00000033863	annotation not available (50 aa)
	LOC107594870	Saxitoxin and tetrodotoxin-binding protein 1-like. (202 aa)
	ENSSGRP00000091553	Uncharacterized protein LOC107594346. (177 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000027762	ENSSGRP00000033355	ENSSGRP00000027762	ENSSGRP00000033355	annotation not available	annotation not available	0.495
ENSSGRP00000027762	ENSSGRP00000033863	ENSSGRP00000027762	ENSSGRP00000033863	annotation not available	annotation not available	0.534
ENSSGRP00000027762	ENSSGRP00000091553	ENSSGRP00000027762	ENSSGRP00000091553	annotation not available	Uncharacterized protein LOC107594346.	0.462
ENSSGRP00000027762	LOC107594870	ENSSGRP00000027762	ENSSGRP00000089359	annotation not available	Saxitoxin and tetrodotoxin-binding protein 1-like.	0.468
ENSSGRP00000033355	ENSSGRP00000027762	ENSSGRP00000033355	ENSSGRP00000027762	annotation not available	annotation not available	0.495
ENSSGRP00000033355	ENSSGRP00000033863	ENSSGRP00000033355	ENSSGRP00000033863	annotation not available	annotation not available	0.527
ENSSGRP00000033355	ENSSGRP00000091553	ENSSGRP00000033355	ENSSGRP00000091553	annotation not available	Uncharacterized protein LOC107594346.	0.462
ENSSGRP00000033355	LOC107594870	ENSSGRP00000033355	ENSSGRP00000089359	annotation not available	Saxitoxin and tetrodotoxin-binding protein 1-like.	0.455
ENSSGRP00000033863	ENSSGRP00000027762	ENSSGRP00000033863	ENSSGRP00000027762	annotation not available	annotation not available	0.534
ENSSGRP00000033863	ENSSGRP00000033355	ENSSGRP00000033863	ENSSGRP00000033355	annotation not available	annotation not available	0.527
ENSSGRP00000033863	ENSSGRP00000091553	ENSSGRP00000033863	ENSSGRP00000091553	annotation not available	Uncharacterized protein LOC107594346.	0.496
ENSSGRP00000033863	LOC107594870	ENSSGRP00000033863	ENSSGRP00000089359	annotation not available	Saxitoxin and tetrodotoxin-binding protein 1-like.	0.486
ENSSGRP00000091553	ENSSGRP00000027762	ENSSGRP00000091553	ENSSGRP00000027762	Uncharacterized protein LOC107594346.	annotation not available	0.462
ENSSGRP00000091553	ENSSGRP00000033355	ENSSGRP00000091553	ENSSGRP00000033355	Uncharacterized protein LOC107594346.	annotation not available	0.462
ENSSGRP00000091553	ENSSGRP00000033863	ENSSGRP00000091553	ENSSGRP00000033863	Uncharacterized protein LOC107594346.	annotation not available	0.496
ENSSGRP00000091553	LOC107594870	ENSSGRP00000091553	ENSSGRP00000089359	Uncharacterized protein LOC107594346.	Saxitoxin and tetrodotoxin-binding protein 1-like.	0.440
LOC107594870	ENSSGRP00000027762	ENSSGRP00000089359	ENSSGRP00000027762	Saxitoxin and tetrodotoxin-binding protein 1-like.	annotation not available	0.468
LOC107594870	ENSSGRP00000033355	ENSSGRP00000089359	ENSSGRP00000033355	Saxitoxin and tetrodotoxin-binding protein 1-like.	annotation not available	0.455
LOC107594870	ENSSGRP00000033863	ENSSGRP00000089359	ENSSGRP00000033863	Saxitoxin and tetrodotoxin-binding protein 1-like.	annotation not available	0.486
LOC107594870	ENSSGRP00000091553	ENSSGRP00000089359	ENSSGRP00000091553	Saxitoxin and tetrodotoxin-binding protein 1-like.	Uncharacterized protein LOC107594346.	0.440