STRINGSTRING
LOC107563557 LOC107563557 eif4a3 eif4a3 ENSSGRP00000052096 ENSSGRP00000052096 ENSSGRP00000052097 ENSSGRP00000052097 ENSSGRP00000054536 ENSSGRP00000054536 LOC107589040 LOC107589040 ENSSGRP00000055564 ENSSGRP00000055564 LOC107569251 LOC107569251 LOC107589184 LOC107589184 LOC107552075 LOC107552075 ENSSGRP00000110756 ENSSGRP00000110756 upf3b upf3b LOC107588313 LOC107588313 ENSSGRP00000099627 ENSSGRP00000099627 ENSSGRP00000099256 ENSSGRP00000099256 ENSSGRP00000099024 ENSSGRP00000099024 LOC107592456 LOC107592456 ENSSGRP00000096547 ENSSGRP00000096547 ENSSGRP00000095182 ENSSGRP00000095182 LOC107585049 LOC107585049 ENSSGRP00000094217 ENSSGRP00000094217 upf1 upf1 LOC107590561 LOC107590561 ENSSGRP00000082288 ENSSGRP00000082288 UPF2 UPF2 LOC107587761 LOC107587761 LOC107595308 LOC107595308 NCBP1 NCBP1 ENSSGRP00000076066 ENSSGRP00000076066 ENSSGRP00000069308 ENSSGRP00000069308 ENSSGRP00000068545 ENSSGRP00000068545 upf3a upf3a LOC107589291 LOC107589291 ENSSGRP00000001839 ENSSGRP00000001839 ENSSGRP00000002591 ENSSGRP00000002591 LOC107592145 LOC107592145 ENSSGRP00000003666 ENSSGRP00000003666 ENSSGRP00000006210 ENSSGRP00000006210 ENSSGRP00000007313 ENSSGRP00000007313 ENSSGRP00000007448 ENSSGRP00000007448 ENSSGRP00000008040 ENSSGRP00000008040 LOC107597121 LOC107597121 dcp1a dcp1a ENSSGRP00000010414 ENSSGRP00000010414 ENSSGRP00000011166 ENSSGRP00000011166 ncbp2 ncbp2 ENSSGRP00000016444 ENSSGRP00000016444 ENSSGRP00000017283 ENSSGRP00000017283 ENSSGRP00000020412 ENSSGRP00000020412 ENSSGRP00000020415 ENSSGRP00000020415 ENSSGRP00000023512 ENSSGRP00000023512 LOC107585897 LOC107585897 ENSSGRP00000028050 ENSSGRP00000028050 LOC107570844 LOC107570844 LOC107549138 LOC107549138 ENSSGRP00000033138 ENSSGRP00000033138 ENSSGRP00000036761 ENSSGRP00000036761 LOC107572958 LOC107572958 DCP1A DCP1A LOC107577889 LOC107577889 ENSSGRP00000047160 ENSSGRP00000047160 ENSSGRP00000050202 ENSSGRP00000050202
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC107563557Protein SMG7-like isoform X1. (1171 aa)
eif4a3Eukaryotic initiation factor 4A-III. (408 aa)
ENSSGRP00000052096Helicase with zinc finger domain 2-like. (485 aa)
ENSSGRP00000052097annotation not available (206 aa)
ENSSGRP00000054536Regulator of nonsense transcripts 3B-like. (374 aa)
LOC107589040MRNA-decapping enzyme 1B-like. (499 aa)
ENSSGRP00000055564annotation not available (498 aa)
LOC107569251Nuclear cap-binding protein subunit 2-like. (104 aa)
LOC107589184Protein SMG8-like. (917 aa)
LOC107552075Eukaryotic peptide chain release factor subunit 1. (442 aa)
ENSSGRP00000110756Si:dkey-97a13.6. (2494 aa)
upf3bRegulator of nonsense transcripts 3B. (459 aa)
LOC107588313Eukaryotic peptide chain release factor subunit 1-like isoform X1. (449 aa)
ENSSGRP00000099627annotation not available (1168 aa)
ENSSGRP00000099256Protein CASC3-like. (752 aa)
ENSSGRP00000099024Eukaryotic peptide chain release factor subunit 1-like. (403 aa)
LOC107592456RNA-binding protein 8A-like. (174 aa)
ENSSGRP00000096547SMG5 nonsense mediated mRNA decay factor. (1056 aa)
ENSSGRP00000095182annotation not available (89 aa)
LOC107585049Protein CASC3. (758 aa)
ENSSGRP00000094217CBP80/20-dependent translation initiation factor. (625 aa)
upf1Regulator of nonsense transcripts 1 isoform X1. (1116 aa)
LOC107590561MRNA-decapping enzyme 1B-like. (517 aa)
ENSSGRP00000082288Regulator of nonsense transcripts 3A-like. (413 aa)
UPF2UPF2 regulator of nonsense mediated mRNA decay. (1192 aa)
LOC107587761Proline-rich nuclear receptor coactivator 2-like. (147 aa)
LOC107595308Protein SMG9. (504 aa)
NCBP1Nuclear cap-binding protein subunit 1. (774 aa)
ENSSGRP00000076066Neuroblastoma-amplified sequence. (1882 aa)
ENSSGRP00000069308Protein SMG7-like isoform X1. (1153 aa)
ENSSGRP00000068545Decapping mRNA 2. (235 aa)
upf3aRegulator of nonsense transcripts 3A isoform X1. (481 aa)
LOC107589291Telomerase-binding protein EST1A-like. (1571 aa)
ENSSGRP00000001839Serine/threonine-protein kinase SMG1-like isoform X1. (3624 aa)
ENSSGRP00000002591Serine/threonine-protein kinase SMG1-like. (3531 aa)
LOC107592145RNA-binding protein 8A. (174 aa)
ENSSGRP00000003666SMG5 nonsense mediated mRNA decay factor. (1001 aa)
ENSSGRP00000006210annotation not available (370 aa)
ENSSGRP00000007313Regulator of nonsense transcripts 1-like. (946 aa)
ENSSGRP00000007448Regulator of nonsense transcripts 3A-like. (123 aa)
ENSSGRP00000008040Eukaryotic peptide chain release factor subunit 1-like. (88 aa)
LOC107597121Proline-rich nuclear receptor coactivator 2-like. (155 aa)
dcp1aMRNA-decapping enzyme 1A isoform X1. (452 aa)
ENSSGRP00000010414annotation not available (212 aa)
ENSSGRP00000011166Regulator of nonsense transcripts 3B-like. (119 aa)
ncbp2Nuclear cap-binding protein subunit 2. (162 aa)
ENSSGRP00000016444MRNA-decapping enzyme subunit 2. (379 aa)
ENSSGRP00000017283annotation not available (629 aa)
ENSSGRP00000020412Helicase with zinc finger domain 2-like. (239 aa)
ENSSGRP00000020415annotation not available (1936 aa)
ENSSGRP00000023512Helicase SKI2W-like. (1231 aa)
LOC107585897Protein mago nashi homolog. (147 aa)
ENSSGRP00000028050annotation not available (1377 aa)
LOC107570844Protein SMG9-like. (503 aa)
LOC107549138Protein mago nashi homolog. (147 aa)
ENSSGRP00000033138Partner of Y14 and mago B-like. (180 aa)
ENSSGRP00000036761Helicase with zinc finger domain 2-like. (1438 aa)
LOC107572958Partner of Y14 and mago-like. (197 aa)
DCP1AMRNA-decapping enzyme 1A-like. (401 aa)
LOC107577889Protein SMG8-like. (917 aa)
ENSSGRP00000047160Telomerase-binding protein EST1A-like. (1548 aa)
ENSSGRP00000050202CBP80/20-dependent translation initiation factor. (577 aa)
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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