(43 nodes) Semaphorin receptor activity network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000012404	annotation not available (1845 aa)
	ENSSGRP00000002253	annotation not available (50 aa)
	ENSSGRP00000005170	annotation not available (204 aa)
	ENSSGRP00000007186	Plexin-B2-like. (1873 aa)
	ENSSGRP00000009400	annotation not available (86 aa)
	LOC107574004	Proto-oncogene tyrosine-protein kinase Met. (947 aa)
	ENSSGRP00000015112	Macrophage stimulating 1 receptor b. (1281 aa)
	ENSSGRP00000024696	Plexin-A4-like. (1865 aa)
	ENSSGRP00000025431	Neuropilin 2a. (875 aa)
	ENSSGRP00000025434	annotation not available (192 aa)
	ENSSGRP00000025436	annotation not available (101 aa)
	ENSSGRP00000025880	Plexin-B2-like. (1727 aa)
	LOC107565689	Neuropilin-1a. (926 aa)
	ENSSGRP00000030465	Neuropilin 1a. (656 aa)
	ENSSGRP00000033193	annotation not available (502 aa)
	ENSSGRP00000035917	Plexin-B2-like. (238 aa)
	ENSSGRP00000037218	annotation not available (545 aa)
	PLXNA2	Plexin-A2-like. (1442 aa)
	LOC107586348	Plexin-B1-like isoform X1. (2207 aa)
	ENSSGRP00000038655	Plexin-A1-like. (1841 aa)
	LOC107594012	Plexin-A2-like. (1916 aa)
	LOC107599375	Plexin-A1-like. (1885 aa)
	ENSSGRP00000043915	Plexin-B1-like. (2017 aa)
	ENSSGRP00000044783	annotation not available (1825 aa)
	ENSSGRP00000049071	Plexin-A4. (1917 aa)
	Plxnc1	Plexin-C1. (305 aa)
	ENSSGRP00000054750	annotation not available (251 aa)
	ENSSGRP00000066931	Plexin-B3-like. (1811 aa)
	ENSSGRP00000069360	Neuropilin-2-like. (806 aa)
	ENSSGRP00000070293	annotation not available (50 aa)
	LOC107565396	Plexin-D1-like. (1863 aa)
	ENSSGRP00000071289	Plexin A3. (1856 aa)
	LOC107584461	Macrophage-stimulating protein receptor-like isoform X1. (1355 aa)
	ENSSGRP00000077351	Plexin-B1-like isoform X1. (2125 aa)
	ENSSGRP00000081851	Plexin A3. (1704 aa)
	LOC107601751	Plexin-B1-like. (1224 aa)
	ENSSGRP00000088491	Macrophage-stimulating protein receptor-like. (1321 aa)
	PLXND1	Plexin-D1 isoform X1. (1902 aa)
	ENSSGRP00000099227	annotation not available (41 aa)
	LOC107574814	Hepatocyte growth factor receptor-like isoform X1. (1381 aa)
	ENSSGRP00000102054	LOW QUALITY PROTEIN: plexin-B1-like. (2210 aa)
	LOC107587155	Plexin-B2-like. (1865 aa)
	LOC107552655	Macrophage-stimulating protein receptor-like isoform X1. (1356 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000002253	ENSSGRP00000015112	ENSSGRP00000002253	ENSSGRP00000015112	annotation not available	Macrophage stimulating 1 receptor b.	0.418
ENSSGRP00000002253	ENSSGRP00000030465	ENSSGRP00000002253	ENSSGRP00000030465	annotation not available	Neuropilin 1a.	0.705
ENSSGRP00000002253	ENSSGRP00000054750	ENSSGRP00000002253	ENSSGRP00000054750	annotation not available	annotation not available	0.418
ENSSGRP00000002253	ENSSGRP00000088491	ENSSGRP00000002253	ENSSGRP00000088491	annotation not available	Macrophage-stimulating protein receptor-like.	0.418
ENSSGRP00000002253	LOC107552655	ENSSGRP00000002253	ENSSGRP00000110289	annotation not available	Macrophage-stimulating protein receptor-like isoform X1.	0.418
ENSSGRP00000002253	LOC107565689	ENSSGRP00000002253	ENSSGRP00000028890	annotation not available	Neuropilin-1a.	0.705
ENSSGRP00000002253	LOC107574004	ENSSGRP00000002253	ENSSGRP00000013058	annotation not available	Proto-oncogene tyrosine-protein kinase Met.	0.418
ENSSGRP00000002253	LOC107574814	ENSSGRP00000002253	ENSSGRP00000101776	annotation not available	Hepatocyte growth factor receptor-like isoform X1.	0.418
ENSSGRP00000002253	LOC107584461	ENSSGRP00000002253	ENSSGRP00000074245	annotation not available	Macrophage-stimulating protein receptor-like isoform X1.	0.418
ENSSGRP00000005170	ENSSGRP00000015112	ENSSGRP00000005170	ENSSGRP00000015112	annotation not available	Macrophage stimulating 1 receptor b.	0.418
ENSSGRP00000005170	ENSSGRP00000030465	ENSSGRP00000005170	ENSSGRP00000030465	annotation not available	Neuropilin 1a.	0.705
ENSSGRP00000005170	ENSSGRP00000054750	ENSSGRP00000005170	ENSSGRP00000054750	annotation not available	annotation not available	0.418
ENSSGRP00000005170	ENSSGRP00000088491	ENSSGRP00000005170	ENSSGRP00000088491	annotation not available	Macrophage-stimulating protein receptor-like.	0.418
ENSSGRP00000005170	LOC107552655	ENSSGRP00000005170	ENSSGRP00000110289	annotation not available	Macrophage-stimulating protein receptor-like isoform X1.	0.418
ENSSGRP00000005170	LOC107565689	ENSSGRP00000005170	ENSSGRP00000028890	annotation not available	Neuropilin-1a.	0.705
ENSSGRP00000005170	LOC107574004	ENSSGRP00000005170	ENSSGRP00000013058	annotation not available	Proto-oncogene tyrosine-protein kinase Met.	0.418
ENSSGRP00000005170	LOC107574814	ENSSGRP00000005170	ENSSGRP00000101776	annotation not available	Hepatocyte growth factor receptor-like isoform X1.	0.418
ENSSGRP00000005170	LOC107584461	ENSSGRP00000005170	ENSSGRP00000074245	annotation not available	Macrophage-stimulating protein receptor-like isoform X1.	0.418
ENSSGRP00000007186	ENSSGRP00000015112	ENSSGRP00000007186	ENSSGRP00000015112	Plexin-B2-like.	Macrophage stimulating 1 receptor b.	0.528
ENSSGRP00000007186	ENSSGRP00000030465	ENSSGRP00000007186	ENSSGRP00000030465	Plexin-B2-like.	Neuropilin 1a.	0.679