(35 nodes) Sialic acid binding network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000014597	annotation not available (263 aa)
	ENSSGRP00000004735	Myelin-associated glycoprotein-like. (454 aa)
	ENSSGRP00000004746	Si:dkey-238d18.5. (279 aa)
	ENSSGRP00000004750	Sialoadhesin-like isoform X1. (310 aa)
	ENSSGRP00000004759	B-cell receptor CD22-like isoform X1. (1013 aa)
	ENSSGRP00000006808	annotation not available (96 aa)
	ENSSGRP00000014595	annotation not available (240 aa)
	ENSSGRP00000002014	Myelin-associated glycoprotein-like. (404 aa)
	ENSSGRP00000014599	Uncharacterized protein LOC107575263. (285 aa)
	ENSSGRP00000017178	Sialic acid-binding Ig-like lectin 14. (384 aa)
	ENSSGRP00000017189	Contactin-5-like. (825 aa)
	ENSSGRP00000017399	annotation not available (306 aa)
	ENSSGRP00000019298	Sialic acid-binding Ig-like lectin 14 isoform X1. (264 aa)
	LOC107585169	Neuronal growth regulator 1-like isoform X1. (345 aa)
	LOC107587088	Myelin-associated glycoprotein-like isoform X1. (653 aa)
	ENSSGRP00000026580	Opioid-binding protein/cell adhesion molecule homolog. (171 aa)
	ENSSGRP00000026582	annotation not available (63 aa)
	ENSSGRP00000026583	Neurotrimin. (165 aa)
	LOC107577150	Opioid-binding protein/cell adhesion molecule-like isoform X1. (339 aa)
	ENSSGRP00000026734	annotation not available (331 aa)
	ENSSGRP00000027081	Agrin-like. (2022 aa)
	ENSSGRP00000027149	Sialic acid-binding Ig-like lectin 14. (290 aa)
	ENSSGRP00000028523	Limbic system-associated membrane protein-like. (313 aa)
	LOC107582243	Myelin-associated glycoprotein-like isoform X1. (653 aa)
	ENSSGRP00000051244	Limbic system-associated membrane protein-like. (309 aa)
	ENSSGRP00000053213	Neurotrimin-like isoform X1. (361 aa)
	LOC107588660	Opioid-binding protein/cell adhesion molecule-like isoform X1. (339 aa)
	ENSSGRP00000061726	Myelin-associated glycoprotein-like. (387 aa)
	LOC107582736	Neuronal growth regulator 1-like. (429 aa)
	LOC107566714	Adiponectin-like. (276 aa)
	ENSSGRP00000094505	annotation not available (241 aa)
	ENSSGRP00000096255	B-cell receptor CD22-like. (397 aa)
	ENSSGRP00000096268	Si:dkey-33i11.1. (347 aa)
	Iglon5	Opioid binding protein/cell adhesion molecule-like. (310 aa)
	LOC107591095	Agrin-like isoform X1. (2037 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000004735	ENSSGRP00000061726	ENSSGRP00000004735	ENSSGRP00000061726	Myelin-associated glycoprotein-like.	Myelin-associated glycoprotein-like.	0.900
ENSSGRP00000004735	LOC107582243	ENSSGRP00000004735	ENSSGRP00000035817	Myelin-associated glycoprotein-like.	Myelin-associated glycoprotein-like isoform X1.	0.900
ENSSGRP00000004735	LOC107587088	ENSSGRP00000004735	ENSSGRP00000023916	Myelin-associated glycoprotein-like.	Myelin-associated glycoprotein-like isoform X1.	0.900
ENSSGRP00000026580	ENSSGRP00000094505	ENSSGRP00000026580	ENSSGRP00000094505	Opioid-binding protein/cell adhesion molecule homolog.	annotation not available	0.446
ENSSGRP00000026580	Iglon5	ENSSGRP00000026580	ENSSGRP00000106112	Opioid-binding protein/cell adhesion molecule homolog.	Opioid binding protein/cell adhesion molecule-like.	0.446
ENSSGRP00000026582	ENSSGRP00000094505	ENSSGRP00000026582	ENSSGRP00000094505	annotation not available	annotation not available	0.446
ENSSGRP00000026582	Iglon5	ENSSGRP00000026582	ENSSGRP00000106112	annotation not available	Opioid binding protein/cell adhesion molecule-like.	0.446
ENSSGRP00000026583	ENSSGRP00000094505	ENSSGRP00000026583	ENSSGRP00000094505	Neurotrimin.	annotation not available	0.446
ENSSGRP00000026583	Iglon5	ENSSGRP00000026583	ENSSGRP00000106112	Neurotrimin.	Opioid binding protein/cell adhesion molecule-like.	0.446
ENSSGRP00000027081	LOC107591095	ENSSGRP00000027081	ENSSGRP00000001826	Agrin-like.	Agrin-like isoform X1.	0.900
ENSSGRP00000028523	ENSSGRP00000094505	ENSSGRP00000028523	ENSSGRP00000094505	Limbic system-associated membrane protein-like.	annotation not available	0.446
ENSSGRP00000028523	Iglon5	ENSSGRP00000028523	ENSSGRP00000106112	Limbic system-associated membrane protein-like.	Opioid binding protein/cell adhesion molecule-like.	0.446
ENSSGRP00000051244	ENSSGRP00000094505	ENSSGRP00000051244	ENSSGRP00000094505	Limbic system-associated membrane protein-like.	annotation not available	0.446
ENSSGRP00000051244	Iglon5	ENSSGRP00000051244	ENSSGRP00000106112	Limbic system-associated membrane protein-like.	Opioid binding protein/cell adhesion molecule-like.	0.446
ENSSGRP00000053213	ENSSGRP00000094505	ENSSGRP00000053213	ENSSGRP00000094505	Neurotrimin-like isoform X1.	annotation not available	0.446
ENSSGRP00000053213	Iglon5	ENSSGRP00000053213	ENSSGRP00000106112	Neurotrimin-like isoform X1.	Opioid binding protein/cell adhesion molecule-like.	0.446
ENSSGRP00000061726	ENSSGRP00000004735	ENSSGRP00000061726	ENSSGRP00000004735	Myelin-associated glycoprotein-like.	Myelin-associated glycoprotein-like.	0.900
ENSSGRP00000061726	LOC107582243	ENSSGRP00000061726	ENSSGRP00000035817	Myelin-associated glycoprotein-like.	Myelin-associated glycoprotein-like isoform X1.	0.900
ENSSGRP00000061726	LOC107587088	ENSSGRP00000061726	ENSSGRP00000023916	Myelin-associated glycoprotein-like.	Myelin-associated glycoprotein-like isoform X1.	0.900
ENSSGRP00000094505	ENSSGRP00000026580	ENSSGRP00000094505	ENSSGRP00000026580	annotation not available	Opioid-binding protein/cell adhesion molecule homolog.	0.446