(17 nodes) Seh1-associated complex network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000064175	WD repeat-containing protein 59-like. (766 aa)
	ENSSGRP00000063882	annotation not available (346 aa)
	ENSSGRP00000048908	SEH1-like (S. cerevisiae). (340 aa)
	seh1l	Nucleoporin SEH1 isoform X1. (410 aa)
	ENSSGRP00000044149	DEP domain containing 5, GATOR1 subcomplex subunit. (1480 aa)
	ENSSGRP00000045137	DEP domain containing 5, GATOR1 subcomplex subunit. (1393 aa)
	nprl2	Nitrogen permease regulator 2-like protein isoform X1. (379 aa)
	ENSSGRP00000096176	annotation not available (64 aa)
	LOC107557974	Protein transport protein SEC13. (325 aa)
	ENSSGRP00000007709	annotation not available (60 aa)
	ENSSGRP00000011510	WD repeat-containing protein 24-like. (714 aa)
	ENSSGRP00000036947	NPR3-like, GATOR1 complex subunit. (585 aa)
	LOC107596811	Nitrogen permease regulator 3-like protein isoform X1. (609 aa)
	LOC107562731	Protein transport protein SEC13. (320 aa)
	wdr24	WD repeat-containing protein 24 isoform X1. (779 aa)
	wdr59	WD repeat-containing protein 59 isoform X1. (960 aa)
	ENSSGRP00000066073	Nucleoporin seh1-like. (333 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000007709	ENSSGRP00000011510	ENSSGRP00000007709	ENSSGRP00000011510	annotation not available	WD repeat-containing protein 24-like.	0.972
ENSSGRP00000007709	ENSSGRP00000044149	ENSSGRP00000007709	ENSSGRP00000044149	annotation not available	DEP domain containing 5, GATOR1 subcomplex subunit.	0.975
ENSSGRP00000007709	ENSSGRP00000045137	ENSSGRP00000007709	ENSSGRP00000045137	annotation not available	DEP domain containing 5, GATOR1 subcomplex subunit.	0.975
ENSSGRP00000007709	ENSSGRP00000048908	ENSSGRP00000007709	ENSSGRP00000048908	annotation not available	SEH1-like (S. cerevisiae).	0.861
ENSSGRP00000007709	ENSSGRP00000063882	ENSSGRP00000007709	ENSSGRP00000063882	annotation not available	annotation not available	0.861
ENSSGRP00000007709	ENSSGRP00000064175	ENSSGRP00000007709	ENSSGRP00000064175	annotation not available	WD repeat-containing protein 59-like.	0.972
ENSSGRP00000007709	ENSSGRP00000066073	ENSSGRP00000007709	ENSSGRP00000066073	annotation not available	Nucleoporin seh1-like.	0.861
ENSSGRP00000007709	LOC107557974	ENSSGRP00000007709	ENSSGRP00000095593	annotation not available	Protein transport protein SEC13.	0.915
ENSSGRP00000007709	LOC107562731	ENSSGRP00000007709	ENSSGRP00000075149	annotation not available	Protein transport protein SEC13.	0.915
ENSSGRP00000007709	nprl2	ENSSGRP00000007709	ENSSGRP00000101600	annotation not available	Nitrogen permease regulator 2-like protein isoform X1.	0.996
ENSSGRP00000007709	seh1l	ENSSGRP00000007709	ENSSGRP00000043376	annotation not available	Nucleoporin SEH1 isoform X1.	0.861
ENSSGRP00000007709	wdr24	ENSSGRP00000007709	ENSSGRP00000043177	annotation not available	WD repeat-containing protein 24 isoform X1.	0.972
ENSSGRP00000007709	wdr59	ENSSGRP00000007709	ENSSGRP00000067509	annotation not available	WD repeat-containing protein 59 isoform X1.	0.972
ENSSGRP00000011510	ENSSGRP00000007709	ENSSGRP00000011510	ENSSGRP00000007709	WD repeat-containing protein 24-like.	annotation not available	0.972
ENSSGRP00000011510	ENSSGRP00000036947	ENSSGRP00000011510	ENSSGRP00000036947	WD repeat-containing protein 24-like.	NPR3-like, GATOR1 complex subunit.	0.972
ENSSGRP00000011510	ENSSGRP00000044149	ENSSGRP00000011510	ENSSGRP00000044149	WD repeat-containing protein 24-like.	DEP domain containing 5, GATOR1 subcomplex subunit.	0.995
ENSSGRP00000011510	ENSSGRP00000045137	ENSSGRP00000011510	ENSSGRP00000045137	WD repeat-containing protein 24-like.	DEP domain containing 5, GATOR1 subcomplex subunit.	0.995
ENSSGRP00000011510	ENSSGRP00000048908	ENSSGRP00000011510	ENSSGRP00000048908	WD repeat-containing protein 24-like.	SEH1-like (S. cerevisiae).	0.978
ENSSGRP00000011510	ENSSGRP00000063882	ENSSGRP00000011510	ENSSGRP00000063882	WD repeat-containing protein 24-like.	annotation not available	0.975
ENSSGRP00000011510	ENSSGRP00000064175	ENSSGRP00000011510	ENSSGRP00000064175	WD repeat-containing protein 24-like.	WD repeat-containing protein 59-like.	0.999