STRINGSTRING
LOC107588130 LOC107588130 ENSSGRP00000080948 ENSSGRP00000080948 LOC107591968 LOC107591968 eri1 eri1 ENSSGRP00000092394 ENSSGRP00000092394 LOC107589379 LOC107589379 ENSSGRP00000108839 ENSSGRP00000108839 LOC107587209 LOC107587209 ENSSGRP00000014453 ENSSGRP00000014453 ENSSGRP00000014454 ENSSGRP00000014454 ENSSGRP00000018837 ENSSGRP00000018837 ENSSGRP00000019552 ENSSGRP00000019552 LOC107548897 LOC107548897 LOC107557071 LOC107557071 LOC107590066 LOC107590066 ENSSGRP00000032236 ENSSGRP00000032236 ENSSGRP00000038727 ENSSGRP00000038727 LOC107565777 LOC107565777 LOC107601502 LOC107601502 LOC107571494 LOC107571494 LOC107587645 LOC107587645 ENSSGRP00000105360 ENSSGRP00000105360 LOC107590356 LOC107590356 ENSSGRP00000099626 ENSSGRP00000099626 ENSSGRP00000099476 ENSSGRP00000099476 LOC107562691 LOC107562691 LOC107595454 LOC107595454 ENSSGRP00000093291 ENSSGRP00000093291 ENSSGRP00000092965 ENSSGRP00000092965 LOC107598390 LOC107598390 LOC107591745 LOC107591745 Rbm20 Rbm20 LOC107592929 LOC107592929 LOC107565300 LOC107565300 ENSSGRP00000061846 ENSSGRP00000061846 LOC107548576 LOC107548576 ENSSGRP00000064899 ENSSGRP00000064899 ENSSGRP00000068336 ENSSGRP00000068336 ENSSGRP00000072866 ENSSGRP00000072866
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC107588130Splicing factor 1-like. (663 aa)
ENSSGRP00000080948pre-mRNA processing factor 8. (2322 aa)
LOC107591968RNA-binding protein 24-like. (229 aa)
eri13'-5' exoribonuclease 1. (337 aa)
ENSSGRP00000092394Splicing factor U2AF 35 kDa subunit. (236 aa)
LOC107589379Splicing factor U2AF 65 kDa subunit-like isoform X1. (476 aa)
ENSSGRP00000108839Histone acetyltransferase p300-like. (2262 aa)
LOC107587209RNA-binding protein 41-like isoform X1. (449 aa)
ENSSGRP00000014453annotation not available (146 aa)
ENSSGRP00000014454Splicing factor U2AF 65 kDa subunit-like. (285 aa)
ENSSGRP00000018837annotation not available (97 aa)
ENSSGRP00000019552Splicing factor U2AF 65 kDa subunit-like. (304 aa)
LOC107548897U11/U12 small nuclear ribonucleoprotein 65 kDa protein. (510 aa)
LOC107557071Histone RNA hairpin-binding protein-like isoform X1. (331 aa)
LOC107590066Pre-mRNA-splicing factor RBM22/SLT11. (424 aa)
ENSSGRP00000032236Histone acetyltransferase p300-like. (2703 aa)
ENSSGRP00000038727Histone RNA hairpin-binding protein-like isoform X1. (295 aa)
LOC107565777Histone RNA hairpin-binding protein-like. (275 aa)
LOC107601502pre-mRNA-splicing factor SLU7-like. (593 aa)
LOC107571494Pre-mRNA-splicing factor RBM22/SLT11. (422 aa)
LOC107587645U1 small nuclear ribonucleoprotein C isoform X1. (159 aa)
ENSSGRP00000105360Histone acetyltransferase p300-like. (2616 aa)
LOC107590356U11/U12 small nuclear ribonucleoprotein 65 kDa protein. (509 aa)
ENSSGRP00000099626Splicing factor U2AF 35 kDa subunit-like. (87 aa)
ENSSGRP00000099476RNA-binding protein 20-like. (268 aa)
LOC107562691Splicing factor 1-like isoform X1. (660 aa)
LOC107595454U1 small nuclear ribonucleoprotein C-like. (155 aa)
ENSSGRP00000093291RNA-binding protein 41-like isoform X1. (138 aa)
ENSSGRP00000092965Pre-mRNA-splicing factor RBM22/SLT11. (381 aa)
LOC107598390Splicing factor U2AF 65 kDa subunit-like isoform X1. (482 aa)
LOC1075917453'-5' exoribonuclease 1-like isoform X1. (157 aa)
Rbm20RNA-binding protein 20. (265 aa)
LOC107592929RNA-binding protein 24. (229 aa)
LOC107565300RNA-binding protein 24-A-like isoform X1. (223 aa)
ENSSGRP00000061846Splicing factor U2AF 65 kDa subunit. (437 aa)
LOC107548576Pre-mRNA-processing-splicing factor 8-like isoform X1. (2342 aa)
ENSSGRP00000064899U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2-like. (190 aa)
ENSSGRP00000068336U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein. (592 aa)
ENSSGRP00000072866E1A binding protein p300 a. (2591 aa)
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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