(15 nodes) Fanconi anaemia nuclear complex network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107602006	Fanconi anemia group G protein homolog. (615 aa)
	FANCL	FA complementation group L. (256 aa)
	ENSSGRP00000108067	FA complementation group G. (561 aa)
	ENSSGRP00000108064	FA complementation group G. (346 aa)
	LOC107602842	Fanconi anemia group C protein-like isoform X1. (603 aa)
	ENSSGRP00000012687	LOW QUALITY PROTEIN: centromere protein X-like. (103 aa)
	ENSSGRP00000022057	FA complementation group C. (551 aa)
	ENSSGRP00000075340	Uncharacterized protein LOC107555687. (156 aa)
	ENSSGRP00000028067	FA core complex associated protein 24. (185 aa)
	LOC107571303	Centromere protein X-like. (71 aa)
	ENSSGRP00000032432	annotation not available (363 aa)
	Fancm	Fanconi anemia group M protein. (1092 aa)
	fancf	Fanconi anemia group F protein. (332 aa)
	LOC107585345	E3 ubiquitin-protein ligase FANCL-like. (374 aa)
	ENSSGRP00000051038	FA complementation group B. (733 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000012687	ENSSGRP00000022057	ENSSGRP00000012687	ENSSGRP00000022057	LOW QUALITY PROTEIN: centromere protein X-like.	FA complementation group C.	0.467
ENSSGRP00000012687	ENSSGRP00000028067	ENSSGRP00000012687	ENSSGRP00000028067	LOW QUALITY PROTEIN: centromere protein X-like.	FA core complex associated protein 24.	0.685
ENSSGRP00000012687	ENSSGRP00000032432	ENSSGRP00000012687	ENSSGRP00000032432	LOW QUALITY PROTEIN: centromere protein X-like.	annotation not available	0.766
ENSSGRP00000012687	ENSSGRP00000051038	ENSSGRP00000012687	ENSSGRP00000051038	LOW QUALITY PROTEIN: centromere protein X-like.	FA complementation group B.	0.592
ENSSGRP00000012687	ENSSGRP00000075340	ENSSGRP00000012687	ENSSGRP00000075340	LOW QUALITY PROTEIN: centromere protein X-like.	Uncharacterized protein LOC107555687.	0.934
ENSSGRP00000012687	FANCL	ENSSGRP00000012687	ENSSGRP00000045901	LOW QUALITY PROTEIN: centromere protein X-like.	FA complementation group L.	0.501
ENSSGRP00000012687	Fancm	ENSSGRP00000012687	ENSSGRP00000032451	LOW QUALITY PROTEIN: centromere protein X-like.	Fanconi anemia group M protein.	0.975
ENSSGRP00000012687	LOC107571303	ENSSGRP00000012687	ENSSGRP00000030700	LOW QUALITY PROTEIN: centromere protein X-like.	Centromere protein X-like.	0.901
ENSSGRP00000012687	LOC107585345	ENSSGRP00000012687	ENSSGRP00000059056	LOW QUALITY PROTEIN: centromere protein X-like.	E3 ubiquitin-protein ligase FANCL-like.	0.501
ENSSGRP00000012687	LOC107602006	ENSSGRP00000012687	ENSSGRP00000046596	LOW QUALITY PROTEIN: centromere protein X-like.	Fanconi anemia group G protein homolog.	0.868
ENSSGRP00000012687	LOC107602842	ENSSGRP00000012687	ENSSGRP00000091455	LOW QUALITY PROTEIN: centromere protein X-like.	Fanconi anemia group C protein-like isoform X1.	0.888
ENSSGRP00000012687	fancf	ENSSGRP00000012687	ENSSGRP00000067442	LOW QUALITY PROTEIN: centromere protein X-like.	Fanconi anemia group F protein.	0.902
ENSSGRP00000022057	ENSSGRP00000012687	ENSSGRP00000022057	ENSSGRP00000012687	FA complementation group C.	LOW QUALITY PROTEIN: centromere protein X-like.	0.467
ENSSGRP00000022057	ENSSGRP00000028067	ENSSGRP00000022057	ENSSGRP00000028067	FA complementation group C.	FA core complex associated protein 24.	0.877
ENSSGRP00000022057	ENSSGRP00000032432	ENSSGRP00000022057	ENSSGRP00000032432	FA complementation group C.	annotation not available	0.999
ENSSGRP00000022057	ENSSGRP00000051038	ENSSGRP00000022057	ENSSGRP00000051038	FA complementation group C.	FA complementation group B.	0.998
ENSSGRP00000022057	ENSSGRP00000075340	ENSSGRP00000022057	ENSSGRP00000075340	FA complementation group C.	Uncharacterized protein LOC107555687.	0.877
ENSSGRP00000022057	ENSSGRP00000108064	ENSSGRP00000022057	ENSSGRP00000108064	FA complementation group C.	FA complementation group G.	0.981
ENSSGRP00000022057	ENSSGRP00000108067	ENSSGRP00000022057	ENSSGRP00000108067	FA complementation group C.	FA complementation group G.	0.981
ENSSGRP00000022057	FANCL	ENSSGRP00000022057	ENSSGRP00000045901	FA complementation group C.	FA complementation group L.	0.995