(22 nodes) Spleen development network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000029960	Receptor-interacting serine-threonine kinase 3. (364 aa)
	LOC107560775	RING finger and CCCH-type zinc finger domain-containing protein. (1096 aa)
	LOC107567477	Homeobox protein Nkx-2.5-like. (309 aa)
	LOC107598375	Homeobox protein Nkx-2.5-like. (315 aa)
	LOC107571274	Transcription factor 21. (176 aa)
	LOC107549058	Transcription factor 21-like. (176 aa)
	LOC107601037	Homeobox protein Nkx-2.3-like. (321 aa)
	ENSSGRP00000059563	Receptor-interacting serine-threonine kinase 3. (332 aa)
	LOC107585413	Bcl-2-like protein 11 isoform X1. (177 aa)
	ENSSGRP00000066059	Adapter protein CIKS-like. (119 aa)
	LOC107559437	FAS-associated death domain protein-like. (192 aa)
	LOC107588069	RING finger and CCCH-type zinc finger domain-containing protein. (1090 aa)
	LOC107586108	Homeobox protein Nkx-2.3-like. (321 aa)
	LOC107582737	Uncharacterized protein LOC107582737 isoform X1. (442 aa)
	ENSSGRP00000002444	RING finger and CCCH-type zinc finger domain-containing protein. (975 aa)
	ENSSGRP00000002744	Ring finger and CCCH-type domains 1a. (983 aa)
	ENSSGRP00000014694	Roquin-2-like. (951 aa)
	LOC107597639	Bcl-2-like protein 11. (176 aa)
	LOC107595546	RING finger and CCCH-type zinc finger domain-containing protein. (1041 aa)
	ENSSGRP00000019490	Bcl-2-like protein 11 isoform X1. (163 aa)
	LOC107585170	Uncharacterized protein LOC107585170 isoform X1. (442 aa)
	ENSSGRP00000027166	Adapter protein CIKS-like. (115 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000002444	ENSSGRP00000014694	ENSSGRP00000002444	ENSSGRP00000014694	RING finger and CCCH-type zinc finger domain-containing protein.	Roquin-2-like.	0.591
ENSSGRP00000002444	LOC107595546	ENSSGRP00000002444	ENSSGRP00000018764	RING finger and CCCH-type zinc finger domain-containing protein.	RING finger and CCCH-type zinc finger domain-containing protein.	0.589
ENSSGRP00000002744	ENSSGRP00000014694	ENSSGRP00000002744	ENSSGRP00000014694	Ring finger and CCCH-type domains 1a.	Roquin-2-like.	0.604
ENSSGRP00000002744	LOC107595546	ENSSGRP00000002744	ENSSGRP00000018764	Ring finger and CCCH-type domains 1a.	RING finger and CCCH-type zinc finger domain-containing protein.	0.598
ENSSGRP00000014694	ENSSGRP00000002444	ENSSGRP00000014694	ENSSGRP00000002444	Roquin-2-like.	RING finger and CCCH-type zinc finger domain-containing protein.	0.591
ENSSGRP00000014694	ENSSGRP00000002744	ENSSGRP00000014694	ENSSGRP00000002744	Roquin-2-like.	Ring finger and CCCH-type domains 1a.	0.604
ENSSGRP00000014694	LOC107560775	ENSSGRP00000014694	ENSSGRP00000031061	Roquin-2-like.	RING finger and CCCH-type zinc finger domain-containing protein.	0.587
ENSSGRP00000014694	LOC107588069	ENSSGRP00000014694	ENSSGRP00000074427	Roquin-2-like.	RING finger and CCCH-type zinc finger domain-containing protein.	0.590
ENSSGRP00000019490	LOC107585413	ENSSGRP00000019490	ENSSGRP00000065970	Bcl-2-like protein 11 isoform X1.	Bcl-2-like protein 11 isoform X1.	0.900
ENSSGRP00000019490	LOC107597639	ENSSGRP00000019490	ENSSGRP00000016149	Bcl-2-like protein 11 isoform X1.	Bcl-2-like protein 11.	0.900
ENSSGRP00000029960	LOC107559437	ENSSGRP00000029960	ENSSGRP00000074211	Receptor-interacting serine-threonine kinase 3.	FAS-associated death domain protein-like.	0.996
ENSSGRP00000059563	LOC107559437	ENSSGRP00000059563	ENSSGRP00000074211	Receptor-interacting serine-threonine kinase 3.	FAS-associated death domain protein-like.	0.996
LOC107549058	LOC107567477	ENSSGRP00000047802	ENSSGRP00000041521	Transcription factor 21-like.	Homeobox protein Nkx-2.5-like.	0.502
LOC107549058	LOC107598375	ENSSGRP00000047802	ENSSGRP00000041746	Transcription factor 21-like.	Homeobox protein Nkx-2.5-like.	0.502
LOC107559437	ENSSGRP00000029960	ENSSGRP00000074211	ENSSGRP00000029960	FAS-associated death domain protein-like.	Receptor-interacting serine-threonine kinase 3.	0.996
LOC107559437	ENSSGRP00000059563	ENSSGRP00000074211	ENSSGRP00000059563	FAS-associated death domain protein-like.	Receptor-interacting serine-threonine kinase 3.	0.996
LOC107560775	ENSSGRP00000014694	ENSSGRP00000031061	ENSSGRP00000014694	RING finger and CCCH-type zinc finger domain-containing protein.	Roquin-2-like.	0.587
LOC107560775	LOC107595546	ENSSGRP00000031061	ENSSGRP00000018764	RING finger and CCCH-type zinc finger domain-containing protein.	RING finger and CCCH-type zinc finger domain-containing protein.	0.587
LOC107567477	LOC107549058	ENSSGRP00000041521	ENSSGRP00000047802	Homeobox protein Nkx-2.5-like.	Transcription factor 21-like.	0.502
LOC107567477	LOC107571274	ENSSGRP00000041521	ENSSGRP00000045733	Homeobox protein Nkx-2.5-like.	Transcription factor 21.	0.502