(46 nodes) Erythrocyte development network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107599945	Cellular tumor antigen p53. (381 aa)
	ENSSGRP00000061731	AT rich interactive domain 4A (RBP1-like). (1001 aa)
	LOC107584875	Trans-acting T-cell-specific transcription factor GATA-3-like. (409 aa)
	lyar	Cell growth-regulating nucleolar protein. (313 aa)
	ENSSGRP00000071108	T-cell acute lymphocytic leukemia 1. (324 aa)
	bdh2	3-hydroxybutyrate dehydrogenase type 2 isoform X1. (251 aa)
	LOC107592291	Cellular tumor antigen p53-like. (387 aa)
	LOC107584471	Uncharacterized protein LOC107584471. (548 aa)
	ENSSGRP00000076749	3-hydroxybutyrate dehydrogenase, type 2. (235 aa)
	Arid4a	AT-rich interactive domain-containing protein 4A. (1265 aa)
	ENSSGRP00000077727	Excision repair cross-complementation group 2. (678 aa)
	LOC107554555	Rhombotin-2-like. (159 aa)
	rps19	Small subunit ribosomal protein S19e. (156 aa)
	LOC107565018	Solute carrier family 40 (iron-regulated transporter), member 1. (531 aa)
	LOC107550292	SH2B adapter protein 3-like. (659 aa)
	LOC107601732	TFIIH basal transcription factor complex helicase XPD subunit. (783 aa)
	LOC107595276	Erythropoietin. (183 aa)
	LOC107581944	GATA-binding factor 1-B-like. (417 aa)
	LOC107568266	Serum response factor-like isoform X1. (285 aa)
	LOC107559458	Solute carrier family 25 (mitochondrial iron transporter), member 28/37. (351 aa)
	med1	Mediator of RNA polymerase II transcription subunit 1 isoform X1. (1776 aa)
	LOC107553129	Solute carrier family 25 (mitochondrial iron transporter), member 28/37. (307 aa)
	LOC107602151	Solute carrier family 40 member 1-like. (572 aa)
	LOC107588333	Macrophage erythroblast attacher. (419 aa)
	ENSSGRP00000002233	Group 10 secretory phospholipase A2-like. (144 aa)
	ENSSGRP00000005880	T-cell acute lymphocytic leukemia protein 1 homolog. (183 aa)
	ENSSGRP00000006676	Small subunit ribosomal protein S19e. (69 aa)
	LOC107585148	Solute carrier family 48 (heme transporter), member 1. (144 aa)
	LOC107577313	GATA-binding factor 2-like. (253 aa)
	ENSSGRP00000011618	AT-rich interactive domain-containing protein 4A-like. (106 aa)
	RPS19	Small subunit ribosomal protein S19e. (86 aa)
	ENSSGRP00000018198	Serum response factor-like. (238 aa)
	ENSSGRP00000023709	annotation not available (432 aa)
	LOC107560292	Erythropoietin-like. (183 aa)
	ENSSGRP00000036038	GATA-binding factor 1-A-like. (336 aa)
	melk	Maternal embryonic leucine zipper kinase. (675 aa)
	LOC107564700	Group 10 secretory phospholipase A2-like. (157 aa)
	LOC107570222	FERM and PDZ domain-containing protein 1-like. (710 aa)
	LOC107557686	Macrophage erythroblast attacher-like. (430 aa)
	LOC107554475	Rhombotin-2. (182 aa)
	ENSSGRP00000042456	SH2B adapter protein 3-like. (598 aa)
	LOC107551382	Serum response factor-like. (524 aa)
	LOC107549233	5-aminolevulinate synthase, erythroid-specific, mitochondrial-like. (585 aa)
	LOC107599438	2,4-dienoyl-CoA reductase, mitochondrial-like. (565 aa)
	ENSSGRP00000055176	Serum response factor-like. (238 aa)
	ENSSGRP00000056021	GATA-binding factor 1-A-like. (88 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Arid4a	ENSSGRP00000011618	ENSSGRP00000099970	ENSSGRP00000011618	AT-rich interactive domain-containing protein 4A.	AT-rich interactive domain-containing protein 4A-like.	0.671
Arid4a	ENSSGRP00000061731	ENSSGRP00000099970	ENSSGRP00000061731	AT-rich interactive domain-containing protein 4A.	AT rich interactive domain 4A (RBP1-like).	0.675
ENSSGRP00000005880	ENSSGRP00000036038	ENSSGRP00000005880	ENSSGRP00000036038	T-cell acute lymphocytic leukemia protein 1 homolog.	GATA-binding factor 1-A-like.	0.838
ENSSGRP00000005880	ENSSGRP00000056021	ENSSGRP00000005880	ENSSGRP00000056021	T-cell acute lymphocytic leukemia protein 1 homolog.	GATA-binding factor 1-A-like.	0.838
ENSSGRP00000005880	LOC107554475	ENSSGRP00000005880	ENSSGRP00000041959	T-cell acute lymphocytic leukemia protein 1 homolog.	Rhombotin-2.	0.986
ENSSGRP00000005880	LOC107554555	ENSSGRP00000005880	ENSSGRP00000078367	T-cell acute lymphocytic leukemia protein 1 homolog.	Rhombotin-2-like.	0.986
ENSSGRP00000005880	LOC107577313	ENSSGRP00000005880	ENSSGRP00000009367	T-cell acute lymphocytic leukemia protein 1 homolog.	GATA-binding factor 2-like.	0.838
ENSSGRP00000005880	LOC107581944	ENSSGRP00000005880	ENSSGRP00000107263	T-cell acute lymphocytic leukemia protein 1 homolog.	GATA-binding factor 1-B-like.	0.838
ENSSGRP00000005880	LOC107584875	ENSSGRP00000005880	ENSSGRP00000064823	T-cell acute lymphocytic leukemia protein 1 homolog.	Trans-acting T-cell-specific transcription factor GATA-3-like.	0.838
ENSSGRP00000006676	LOC107592291	ENSSGRP00000006676	ENSSGRP00000074183	Small subunit ribosomal protein S19e.	Cellular tumor antigen p53-like.	0.464
ENSSGRP00000006676	LOC107599945	ENSSGRP00000006676	ENSSGRP00000059520	Small subunit ribosomal protein S19e.	Cellular tumor antigen p53.	0.464
ENSSGRP00000006676	RPS19	ENSSGRP00000006676	ENSSGRP00000015831	Small subunit ribosomal protein S19e.	Small subunit ribosomal protein S19e.	0.919
ENSSGRP00000006676	lyar	ENSSGRP00000006676	ENSSGRP00000066660	Small subunit ribosomal protein S19e.	Cell growth-regulating nucleolar protein.	0.839
ENSSGRP00000006676	med1	ENSSGRP00000006676	ENSSGRP00000087272	Small subunit ribosomal protein S19e.	Mediator of RNA polymerase II transcription subunit 1 isoform X1.	0.969
ENSSGRP00000006676	rps19	ENSSGRP00000006676	ENSSGRP00000079320	Small subunit ribosomal protein S19e.	Small subunit ribosomal protein S19e.	0.900
ENSSGRP00000011618	Arid4a	ENSSGRP00000011618	ENSSGRP00000099970	AT-rich interactive domain-containing protein 4A-like.	AT-rich interactive domain-containing protein 4A.	0.671
ENSSGRP00000011618	ENSSGRP00000061731	ENSSGRP00000011618	ENSSGRP00000061731	AT-rich interactive domain-containing protein 4A-like.	AT rich interactive domain 4A (RBP1-like).	0.671
ENSSGRP00000036038	ENSSGRP00000005880	ENSSGRP00000036038	ENSSGRP00000005880	GATA-binding factor 1-A-like.	T-cell acute lymphocytic leukemia protein 1 homolog.	0.838
ENSSGRP00000036038	ENSSGRP00000071108	ENSSGRP00000036038	ENSSGRP00000071108	GATA-binding factor 1-A-like.	T-cell acute lymphocytic leukemia 1.	0.838
ENSSGRP00000036038	LOC107549233	ENSSGRP00000036038	ENSSGRP00000051716	GATA-binding factor 1-A-like.	5-aminolevulinate synthase, erythroid-specific, mitochondrial-like.	0.531