STRINGSTRING
LOC107573058 LOC107573058 ENSSGRP00000009426 ENSSGRP00000009426 ENSSGRP00000028599 ENSSGRP00000028599 ENSSGRP00000032236 ENSSGRP00000032236 ENSSGRP00000037912 ENSSGRP00000037912 LOC107598564 LOC107598564 ENSSGRP00000072866 ENSSGRP00000072866 ENSSGRP00000074248 ENSSGRP00000074248 LOC107589304 LOC107589304 LOC107548180 LOC107548180 LOC107589845 LOC107589845 ENSSGRP00000105360 ENSSGRP00000105360 ENSSGRP00000108839 ENSSGRP00000108839
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC107573058Transforming growth factor beta-1. (380 aa)
ENSSGRP00000009426Transcription initiation factor TFIIB. (337 aa)
ENSSGRP00000028599Retinoblastoma 1. (841 aa)
ENSSGRP00000032236Histone acetyltransferase p300-like. (2703 aa)
ENSSGRP00000037912Transforming growth factor beta-1-like. (376 aa)
LOC107598564Transforming growth factor beta-1-like. (376 aa)
ENSSGRP00000072866E1A binding protein p300 a. (2591 aa)
ENSSGRP00000074248annotation not available (151 aa)
LOC107589304Transforming growth factor beta-1-like. (381 aa)
LOC107548180Retinoblastoma-associated protein-like. (915 aa)
LOC107589845Transcription initiation factor IIB-like. (322 aa)
ENSSGRP00000105360Histone acetyltransferase p300-like. (2616 aa)
ENSSGRP00000108839Histone acetyltransferase p300-like. (2262 aa)
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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