(12 nodes) FAD binding domain of DNA photolyase network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107591284	Deoxyribodipyrimidine photo-lyase. (525 aa)
	LOC107572103	Cryptochrome-2-like isoform X1. (601 aa)
	LOC107560722	Cryptochrome-1-like. (621 aa)
	ENSSGRP00000034198	Cryptochrome circadian regulator 3a. (661 aa)
	ENSSGRP00000019771	Cryptochrome-1-like. (642 aa)
	LOC107593424	Cryptochrome-1-like. (627 aa)
	LOC107589171	Cryptochrome-2-like isoform X1. (483 aa)
	LOC107583389	Cryptochrome-2-like. (521 aa)
	LOC107600154	Deoxyribodipyrimidine photo-lyase-like isoform X1. (814 aa)
	ENSSGRP00000083067	Cryptochrome-1-like isoform X1. (620 aa)
	ENSSGRP00000082587	Cryptochrome DASH. (424 aa)
	ENSSGRP00000064466	LOW QUALITY PROTEIN: cryptochrome-1-like. (568 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000064466	ENSSGRP00000082587	ENSSGRP00000064466	ENSSGRP00000082587	LOW QUALITY PROTEIN: cryptochrome-1-like.	Cryptochrome DASH.	0.439
ENSSGRP00000064466	LOC107591284	ENSSGRP00000064466	ENSSGRP00000057301	LOW QUALITY PROTEIN: cryptochrome-1-like.	Deoxyribodipyrimidine photo-lyase.	0.422
ENSSGRP00000082587	ENSSGRP00000064466	ENSSGRP00000082587	ENSSGRP00000064466	Cryptochrome DASH.	LOW QUALITY PROTEIN: cryptochrome-1-like.	0.439
ENSSGRP00000082587	ENSSGRP00000083067	ENSSGRP00000082587	ENSSGRP00000083067	Cryptochrome DASH.	Cryptochrome-1-like isoform X1.	0.426
ENSSGRP00000083067	ENSSGRP00000082587	ENSSGRP00000083067	ENSSGRP00000082587	Cryptochrome-1-like isoform X1.	Cryptochrome DASH.	0.426
LOC107591284	ENSSGRP00000064466	ENSSGRP00000057301	ENSSGRP00000064466	Deoxyribodipyrimidine photo-lyase.	LOW QUALITY PROTEIN: cryptochrome-1-like.	0.422