STRINGSTRING
AGL02553.1 AGL02553.1 AGL03337.1 AGL03337.1 AGL03279.1 AGL03279.1 AGL00087.1 AGL00087.1 AGL00340.1 AGL00340.1 AGL00428.1 AGL00428.1 AGL00792.1 AGL00792.1 AGL00793.1 AGL00793.1 AGL00937.1 AGL00937.1 AGL00994.1 AGL00994.1 AGL01040.1 AGL01040.1 AGL01085.1 AGL01085.1 AGL01917.1 AGL01917.1 AGL02250.1 AGL02250.1 AGL02423.1 AGL02423.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AGL02553.1Putative transcriptional regulator; PFAM: Cupin domain; Helix-turn-helix. (184 aa)
AGL03337.1PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain. (223 aa)
AGL03279.1cAMP-binding protein; PFAM: Cyclic nucleotide-binding domain. (230 aa)
AGL00087.1Putative transcriptional regulator; PFAM: Cupin domain; Helix-turn-helix. (177 aa)
AGL00340.1Mannose-6-phosphate isomerase; PFAM: Cupin domain. (100 aa)
AGL00428.1Cupin domain-containing protein; PFAM: Cupin domain. (112 aa)
AGL00792.1PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain. (237 aa)
AGL00793.1cAMP-binding protein; PFAM: Cyclic nucleotide-binding domain. (220 aa)
AGL00937.1PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain. (226 aa)
AGL00994.1cAMP-binding protein; PFAM: Cyclic nucleotide-binding domain. (216 aa)
AGL01040.1PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family. (475 aa)
AGL01085.1Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains; PFAM: Sigma-54 interaction domain; Cyclic nucleotide-binding domain. (817 aa)
AGL01917.1Putative signal-transduction protein containing cAMP-binding and CBS domains; PFAM: Putative nucleotidyltransferase substrate binding domain; CBS domain; Cyclic nucleotide-binding domain; Putative nucleotidyltransferase DUF294. (645 aa)
AGL02250.1ABC-type branched-chain amino acid transport system, periplasmic component; PFAM: Sodium:sulfate symporter transmembrane region; Receptor family ligand binding region; Cyclic nucleotide-binding domain. (1009 aa)
AGL02423.1Cupin domain-containing protein; PFAM: Cupin domain. (115 aa)
Your Current Organism:
Desulfallas gibsoniae
NCBI taxonomy Id: 767817
Other names: D. gibsoniae DSM 7213, Desulfallas gibsoniae DSM 7213, Desulfotomaculum gibsoniae DSM 7213, Desulfotomaculum sp. DSM 7213, Desulfotomaculum sp. Groll
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