(12 nodes) Nucleotide-activated protein kinase complex, and Energy dependent regulation of mTOR by LKB1-AMPK network (Sordaria macrospora)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SMAC_03134	Non-specific serine/threonine protein kinase. (706 aa)
	SMAC_03525	WGS project CABT00000000 data, contig 2.9; Involved in DNA replication and cell separation. Belongs to the SDS23 family. (544 aa)
	SMAC_03681	WGS project CABT00000000 data, contig 2.9. (975 aa)
	SMAC_02677	WGS project CABT00000000 data, contig 2.11. (456 aa)
	SMAC_02759	WGS project CABT00000000 data, contig 2.11. (228 aa)
	SMAC_02779	WGS project CABT00000000 data, contig 2.12. (577 aa)
	SMAC_05352	WGS project CABT00000000 data, contig 2.25. (795 aa)
	SMAC_06292	WGS project CABT00000000 data, contig 2.34. (807 aa)
	SMAC_07041	WGS project CABT00000000 data, contig 2.36. (402 aa)
	SMAC_07042	Putative RhoGAP group protein. (1477 aa)
	SMAC_07088	WGS project CABT00000000 data, contig 2.39. (665 aa)
	SMAC_07255	WGS project CABT00000000 data, contig 2.42. (1227 aa)

Your Current Organism:

Sordaria macrospora

NCBI taxonomy Id: 771870
Other names: S. macrospora k-hell, Sordaria macrospora k-hell

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SMAC_02677	SMAC_02759	F7VX57	F7VXD9	WGS project CABT00000000 data, contig 2.11.	WGS project CABT00000000 data, contig 2.11.	0.937
SMAC_02677	SMAC_02779	F7VX57	F7VXG0	WGS project CABT00000000 data, contig 2.11.	WGS project CABT00000000 data, contig 2.12.	0.538
SMAC_02677	SMAC_03134	F7VX57	F7VU49	WGS project CABT00000000 data, contig 2.11.	Non-specific serine/threonine protein kinase.	0.992
SMAC_02677	SMAC_03525	F7VX57	F7VVF4	WGS project CABT00000000 data, contig 2.11.	WGS project CABT00000000 data, contig 2.9; Involved in DNA replication and cell separation. Belongs to the SDS23 family.	0.813
SMAC_02677	SMAC_03681	F7VX57	F7VVV8	WGS project CABT00000000 data, contig 2.11.	WGS project CABT00000000 data, contig 2.9.	0.892
SMAC_02677	SMAC_05352	F7VX57	F7W3M4	WGS project CABT00000000 data, contig 2.11.	WGS project CABT00000000 data, contig 2.25.	0.576
SMAC_02677	SMAC_07041	F7VX57	F7W6X3	WGS project CABT00000000 data, contig 2.11.	WGS project CABT00000000 data, contig 2.36.	0.955
SMAC_02677	SMAC_07042	F7VX57	F7W6X4	WGS project CABT00000000 data, contig 2.11.	Putative RhoGAP group protein.	0.955
SMAC_02677	SMAC_07088	F7VX57	F7W7I0	WGS project CABT00000000 data, contig 2.11.	WGS project CABT00000000 data, contig 2.39.	0.476
SMAC_02677	SMAC_07255	F7VX57	F7W844	WGS project CABT00000000 data, contig 2.11.	WGS project CABT00000000 data, contig 2.42.	0.660
SMAC_02759	SMAC_02677	F7VXD9	F7VX57	WGS project CABT00000000 data, contig 2.11.	WGS project CABT00000000 data, contig 2.11.	0.937
SMAC_02759	SMAC_02779	F7VXD9	F7VXG0	WGS project CABT00000000 data, contig 2.11.	WGS project CABT00000000 data, contig 2.12.	0.738
SMAC_02759	SMAC_03134	F7VXD9	F7VU49	WGS project CABT00000000 data, contig 2.11.	Non-specific serine/threonine protein kinase.	0.541
SMAC_02759	SMAC_05352	F7VXD9	F7W3M4	WGS project CABT00000000 data, contig 2.11.	WGS project CABT00000000 data, contig 2.25.	0.469
SMAC_02759	SMAC_06292	F7VXD9	F7W6D5	WGS project CABT00000000 data, contig 2.11.	WGS project CABT00000000 data, contig 2.34.	0.476
SMAC_02759	SMAC_07041	F7VXD9	F7W6X3	WGS project CABT00000000 data, contig 2.11.	WGS project CABT00000000 data, contig 2.36.	0.854
SMAC_02759	SMAC_07042	F7VXD9	F7W6X4	WGS project CABT00000000 data, contig 2.11.	Putative RhoGAP group protein.	0.854
SMAC_02759	SMAC_07255	F7VXD9	F7W844	WGS project CABT00000000 data, contig 2.11.	WGS project CABT00000000 data, contig 2.42.	0.469
SMAC_02779	SMAC_02677	F7VXG0	F7VX57	WGS project CABT00000000 data, contig 2.12.	WGS project CABT00000000 data, contig 2.11.	0.538
SMAC_02779	SMAC_02759	F7VXG0	F7VXD9	WGS project CABT00000000 data, contig 2.12.	WGS project CABT00000000 data, contig 2.11.	0.738