(13 nodes) Threonine protease network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XSS5_BRAFL	Proteasome subunit alpha type. (212 aa)
	C3XZ66_BRAFL	Proteasome subunit alpha type. (246 aa)
	C3Y0B8_BRAFL	Proteasome subunit alpha type. (255 aa)
	C3YDQ6_BRAFL	Proteasome subunit beta; Belongs to the peptidase T1B family. (258 aa)
	C3YW11_BRAFL	Proteasome subunit beta. (205 aa)
	C3Z0Z0_BRAFL	Proteasome subunit alpha type. (252 aa)
	C3Z346_BRAFL	Proteasome subunit alpha type. (262 aa)
	C3Z568_BRAFL	Proteasome subunit beta. (276 aa)
	C3Z9E7_BRAFL	Proteasome subunit beta. (235 aa)
	C3ZI15_BRAFL	Proteasome subunit beta. (201 aa)
	C3ZIC3_BRAFL	Proteasome subunit beta. (232 aa)
	C3ZPP8_BRAFL	Proteasome subunit alpha type. (241 aa)
	C3ZPW4_BRAFL	Uncharacterized protein. (213 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XSS5_BRAFL	C3XZ66_BRAFL	C3XSS5	C3XZ66	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
C3XSS5_BRAFL	C3Y0B8_BRAFL	C3XSS5	C3Y0B8	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
C3XSS5_BRAFL	C3YDQ6_BRAFL	C3XSS5	C3YDQ6	Proteasome subunit alpha type.	Proteasome subunit beta; Belongs to the peptidase T1B family.	0.999
C3XSS5_BRAFL	C3YW11_BRAFL	C3XSS5	C3YW11	Proteasome subunit alpha type.	Proteasome subunit beta.	0.999
C3XSS5_BRAFL	C3Z0Z0_BRAFL	C3XSS5	C3Z0Z0	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
C3XSS5_BRAFL	C3Z346_BRAFL	C3XSS5	C3Z346	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
C3XSS5_BRAFL	C3Z568_BRAFL	C3XSS5	C3Z568	Proteasome subunit alpha type.	Proteasome subunit beta.	0.999
C3XSS5_BRAFL	C3Z9E7_BRAFL	C3XSS5	C3Z9E7	Proteasome subunit alpha type.	Proteasome subunit beta.	0.999
C3XSS5_BRAFL	C3ZI15_BRAFL	C3XSS5	C3ZI15	Proteasome subunit alpha type.	Proteasome subunit beta.	0.999
C3XSS5_BRAFL	C3ZIC3_BRAFL	C3XSS5	C3ZIC3	Proteasome subunit alpha type.	Proteasome subunit beta.	0.999
C3XSS5_BRAFL	C3ZPP8_BRAFL	C3XSS5	C3ZPP8	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
C3XSS5_BRAFL	C3ZPW4_BRAFL	C3XSS5	C3ZPW4	Proteasome subunit alpha type.	Uncharacterized protein.	0.999
C3XZ66_BRAFL	C3XSS5_BRAFL	C3XZ66	C3XSS5	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
C3XZ66_BRAFL	C3Y0B8_BRAFL	C3XZ66	C3Y0B8	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
C3XZ66_BRAFL	C3YDQ6_BRAFL	C3XZ66	C3YDQ6	Proteasome subunit alpha type.	Proteasome subunit beta; Belongs to the peptidase T1B family.	0.999
C3XZ66_BRAFL	C3YW11_BRAFL	C3XZ66	C3YW11	Proteasome subunit alpha type.	Proteasome subunit beta.	0.999
C3XZ66_BRAFL	C3Z0Z0_BRAFL	C3XZ66	C3Z0Z0	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
C3XZ66_BRAFL	C3Z346_BRAFL	C3XZ66	C3Z346	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
C3XZ66_BRAFL	C3Z568_BRAFL	C3XZ66	C3Z568	Proteasome subunit alpha type.	Proteasome subunit beta.	0.999
C3XZ66_BRAFL	C3Z9E7_BRAFL	C3XZ66	C3Z9E7	Proteasome subunit alpha type.	Proteasome subunit beta.	0.999