STRINGSTRING
C3XTN6_BRAFL C3XTN6_BRAFL C3YFU1_BRAFL C3YFU1_BRAFL C3ZEX9_BRAFL C3ZEX9_BRAFL C3ZPF5_BRAFL C3ZPF5_BRAFL C3ZSN8_BRAFL C3ZSN8_BRAFL
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
C3XTN6_BRAFLC5-epim_C domain-containing protein. (523 aa)
C3YFU1_BRAFLSulfotransferase; Belongs to the sulfotransferase 1 family. (510 aa)
C3ZEX9_BRAFLUncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (480 aa)
C3ZPF5_BRAFLUncharacterized protein. (304 aa)
C3ZSN8_BRAFLSyndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. (1558 aa)
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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