(38 nodes) Positive regulation of macroautophagy network (Branchiostoma floridae)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XPR1_BRAFL	Chorein_N domain-containing protein. (153 aa)
	C3XPR2_BRAFL	UBA domain-containing protein. (4212 aa)
	C3XPY9_BRAFL	Protein kinase domain-containing protein. (347 aa)
	C3XSS2_BRAFL	PX domain-containing protein. (402 aa)
	C3XST6_BRAFL	Uncharacterized protein. (189 aa)
	C3XTE9_BRAFL	Uncharacterized protein. (482 aa)
	C3XU40_BRAFL	Uncharacterized protein. (2155 aa)
	C3XZR9_BRAFL	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (335 aa)
	C3Y0B9_BRAFL	Uncharacterized protein. (229 aa)
	C3Y0K5_BRAFL	RAB3GAP2_N domain-containing protein. (262 aa)
	C3Y0K6_BRAFL	Uncharacterized protein. (149 aa)
	C3Y0K7_BRAFL	Uncharacterized protein. (787 aa)
	C3Y6B2_BRAFL	Uncharacterized protein. (1975 aa)
	C3Y7F3_BRAFL	Protein kinase domain-containing protein. (702 aa)
	C3YDW0_BRAFL	Uncharacterized protein. (951 aa)
	C3YDW7_BRAFL	Uncharacterized protein. (946 aa)
	C3YJB0_BRAFL	WD_REPEATS_REGION domain-containing protein. (739 aa)
	C3YKX2_BRAFL	Deacetylase sirtuin-type domain-containing protein. (312 aa)
	C3YM28_BRAFL	PX domain-containing protein. (428 aa)
	C3YMM0_BRAFL	Uncharacterized protein. (381 aa)
	C3YN60_BRAFL	GOLD domain-containing protein. (128 aa)
	C3YN61_BRAFL	RUN domain-containing protein. (113 aa)
	C3YQ95_BRAFL	Uncharacterized protein. (163 aa)
	C3YQA9_BRAFL	Uncharacterized protein. (198 aa)
	C3YUP9_BRAFL	Protein kinase domain-containing protein. (925 aa)
	C3YW45_BRAFL	PIPK domain-containing protein. (408 aa)
	C3YX97_BRAFL	UDENN FLCN/SMCR8-type domain-containing protein. (996 aa)
	C3YZI8_BRAFL	Uncharacterized protein. (79 aa)
	C3Z095_BRAFL	Uncharacterized protein. (959 aa)
	C3Z4Y1_BRAFL	Uncharacterized protein. (272 aa)
	C3Z790_BRAFL	Uncharacterized protein. (674 aa)
	C3Z791_BRAFL	Rap-GAP domain-containing protein. (1369 aa)
	C3ZE63_BRAFL	CBM20 domain-containing protein. (316 aa)
	C3ZFM1_BRAFL	Aminotran_1_2 domain-containing protein. (468 aa)
	C3ZGJ8_BRAFL	Uncharacterized protein. (363 aa)
	C3ZGJ9_BRAFL	Uncharacterized protein. (3187 aa)
	C3ZHY5_BRAFL	SAM domain-containing protein. (438 aa)
	C3ZPZ7_BRAFL	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (451 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XPY9_BRAFL	C3YKX2_BRAFL	C3XPY9	C3YKX2	Protein kinase domain-containing protein.	Deacetylase sirtuin-type domain-containing protein.	0.538
C3XPY9_BRAFL	C3YMM0_BRAFL	C3XPY9	C3YMM0	Protein kinase domain-containing protein.	Uncharacterized protein.	0.452
C3XPY9_BRAFL	C3Z4Y1_BRAFL	C3XPY9	C3Z4Y1	Protein kinase domain-containing protein.	Uncharacterized protein.	0.431
C3XSS2_BRAFL	C3YM28_BRAFL	C3XSS2	C3YM28	PX domain-containing protein.	PX domain-containing protein.	0.976
C3XTE9_BRAFL	C3YJB0_BRAFL	C3XTE9	C3YJB0	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.856
C3Y0K5_BRAFL	C3Y0K6_BRAFL	C3Y0K5	C3Y0K6	RAB3GAP2_N domain-containing protein.	Uncharacterized protein.	0.508
C3Y0K5_BRAFL	C3Y0K7_BRAFL	C3Y0K5	C3Y0K7	RAB3GAP2_N domain-containing protein.	Uncharacterized protein.	0.942
C3Y0K5_BRAFL	C3Z095_BRAFL	C3Y0K5	C3Z095	RAB3GAP2_N domain-containing protein.	Uncharacterized protein.	0.971
C3Y0K6_BRAFL	C3Y0K5_BRAFL	C3Y0K6	C3Y0K5	Uncharacterized protein.	RAB3GAP2_N domain-containing protein.	0.508
C3Y0K6_BRAFL	C3Y0K7_BRAFL	C3Y0K6	C3Y0K7	Uncharacterized protein.	Uncharacterized protein.	0.458
C3Y0K6_BRAFL	C3Z095_BRAFL	C3Y0K6	C3Z095	Uncharacterized protein.	Uncharacterized protein.	0.971
C3Y0K7_BRAFL	C3Y0K5_BRAFL	C3Y0K7	C3Y0K5	Uncharacterized protein.	RAB3GAP2_N domain-containing protein.	0.942
C3Y0K7_BRAFL	C3Y0K6_BRAFL	C3Y0K7	C3Y0K6	Uncharacterized protein.	Uncharacterized protein.	0.458
C3Y0K7_BRAFL	C3Z095_BRAFL	C3Y0K7	C3Z095	Uncharacterized protein.	Uncharacterized protein.	0.971
C3YDW0_BRAFL	C3YDW7_BRAFL	C3YDW0	C3YDW7	Uncharacterized protein.	Uncharacterized protein.	0.542
C3YDW7_BRAFL	C3YDW0_BRAFL	C3YDW7	C3YDW0	Uncharacterized protein.	Uncharacterized protein.	0.542
C3YJB0_BRAFL	C3XTE9_BRAFL	C3YJB0	C3XTE9	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.856
C3YKX2_BRAFL	C3XPY9_BRAFL	C3YKX2	C3XPY9	Deacetylase sirtuin-type domain-containing protein.	Protein kinase domain-containing protein.	0.538
C3YM28_BRAFL	C3XSS2_BRAFL	C3YM28	C3XSS2	PX domain-containing protein.	PX domain-containing protein.	0.976
C3YMM0_BRAFL	C3XPY9_BRAFL	C3YMM0	C3XPY9	Uncharacterized protein.	Protein kinase domain-containing protein.	0.452