(52 nodes) Flagellated sperm motility network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3YBS5_BRAFL	PKS_ER domain-containing protein. (278 aa)
	C3XPF9_BRAFL	Uncharacterized protein. (1346 aa)
	C3XR59_BRAFL	Ion_trans domain-containing protein. (466 aa)
	C3XU54_BRAFL	Bardet-Biedl syndrome 2 protein homolog. (716 aa)
	C3XU60_BRAFL	GAS domain-containing protein. (486 aa)
	C3XUL0_BRAFL	Uncharacterized protein. (851 aa)
	C3XW52_BRAFL	Uncharacterized protein. (734 aa)
	C3XZ40_BRAFL	Uncharacterized protein. (850 aa)
	C3Y1H6_BRAFL	Uncharacterized protein. (931 aa)
	C3Y1H7_BRAFL	WD_REPEATS_REGION domain-containing protein. (656 aa)
	C3Y1H8_BRAFL	Uncharacterized protein. (94 aa)
	C3Y256_BRAFL	Uncharacterized protein. (377 aa)
	C3Y276_BRAFL	Uncharacterized protein. (902 aa)
	C3Y3I1_BRAFL	Uncharacterized protein. (525 aa)
	C3Y3N6_BRAFL	Uncharacterized protein. (204 aa)
	C3YBS4_BRAFL	Uncharacterized protein. (317 aa)
	C3YBS6_BRAFL	ADH_zinc_N domain-containing protein. (238 aa)
	C3YBZ4_BRAFL	ASH domain-containing protein. (856 aa)
	C3YCA1_BRAFL	WD_REPEATS_REGION domain-containing protein. (625 aa)
	C3YD64_BRAFL	Uncharacterized protein. (255 aa)
	C3YF46_BRAFL	Uncharacterized protein. (420 aa)
	C3YFR9_BRAFL	Ion_trans domain-containing protein. (353 aa)
	C3YFV4_BRAFL	Na_H_Exchanger domain-containing protein. (255 aa)
	C3YGX9_BRAFL	Uncharacterized protein. (195 aa)
	C3YIE4_BRAFL	Calponin-homology (CH) domain-containing protein. (502 aa)
	C3YIE5_BRAFL	Uncharacterized protein. (307 aa)
	C3YIT5_BRAFL	Uncharacterized protein. (626 aa)
	C3YKY8_BRAFL	WD_REPEATS_REGION domain-containing protein. (615 aa)
	C3YM16_BRAFL	Uncharacterized protein. (215 aa)
	C3YMK8_BRAFL	Uncharacterized protein. (996 aa)
	C3YN59_BRAFL	Uncharacterized protein. (303 aa)
	C3YTZ3_BRAFL	Uncharacterized protein. (549 aa)
	C3YW47_BRAFL	Uncharacterized protein. (508 aa)
	C3YX73_BRAFL	Uncharacterized protein. (524 aa)
	C3YYZ2_BRAFL	Uncharacterized protein. (1808 aa)
	C3YZK4_BRAFL	PIH1_CS domain-containing protein. (192 aa)
	C3Z1Y5_BRAFL	Uncharacterized protein. (425 aa)
	C3Z2I9_BRAFL	Uncharacterized protein. (484 aa)
	C3Z7S6_BRAFL	Uncharacterized protein. (1276 aa)
	C3Z8U6_BRAFL	Ion_trans domain-containing protein. (510 aa)
	C3Z8X0_BRAFL	Uncharacterized protein. (1450 aa)
	C3ZAX0_BRAFL	Uncharacterized protein. (322 aa)
	C3ZFA1_BRAFL	Uncharacterized protein. (361 aa)
	C3ZI60_BRAFL	Uncharacterized protein. (555 aa)
	C3ZJ94_BRAFL	Uncharacterized protein. (200 aa)
	C3ZLA0_BRAFL	Calponin-homology (CH) domain-containing protein. (3272 aa)
	C3ZR63_BRAFL	Enkurin domain-containing protein. (276 aa)
	C3ZTM2_BRAFL	Nuclear receptor domain-containing protein. (1232 aa)
	C3ZVP8_BRAFL	Uncharacterized protein. (77 aa)
	C3ZXX5_BRAFL	Uncharacterized protein. (427 aa)
	C3ZXX6_BRAFL	Uncharacterized protein. (195 aa)
	C4A0D4_BRAFL	Uncharacterized protein. (82 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XR59_BRAFL	C3YFR9_BRAFL	C3XR59	C3YFR9	Ion_trans domain-containing protein.	Ion_trans domain-containing protein.	0.971
C3XR59_BRAFL	C3YM16_BRAFL	C3XR59	C3YM16	Ion_trans domain-containing protein.	Uncharacterized protein.	0.717
C3XR59_BRAFL	C3Z8U6_BRAFL	C3XR59	C3Z8U6	Ion_trans domain-containing protein.	Ion_trans domain-containing protein.	0.983
C3XU54_BRAFL	C3YN59_BRAFL	C3XU54	C3YN59	Bardet-Biedl syndrome 2 protein homolog.	Uncharacterized protein.	0.927
C3XU60_BRAFL	C3XZ40_BRAFL	C3XU60	C3XZ40	GAS domain-containing protein.	Uncharacterized protein.	0.520
C3XU60_BRAFL	C3YW47_BRAFL	C3XU60	C3YW47	GAS domain-containing protein.	Uncharacterized protein.	0.494
C3XUL0_BRAFL	C3Y1H7_BRAFL	C3XUL0	C3Y1H7	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.402
C3XUL0_BRAFL	C3Z8X0_BRAFL	C3XUL0	C3Z8X0	Uncharacterized protein.	Uncharacterized protein.	0.516
C3XZ40_BRAFL	C3XU60_BRAFL	C3XZ40	C3XU60	Uncharacterized protein.	GAS domain-containing protein.	0.520
C3XZ40_BRAFL	C3Z2I9_BRAFL	C3XZ40	C3Z2I9	Uncharacterized protein.	Uncharacterized protein.	0.422
C3XZ40_BRAFL	C3Z8X0_BRAFL	C3XZ40	C3Z8X0	Uncharacterized protein.	Uncharacterized protein.	0.448
C3XZ40_BRAFL	C3ZAX0_BRAFL	C3XZ40	C3ZAX0	Uncharacterized protein.	Uncharacterized protein.	0.503
C3XZ40_BRAFL	C3ZTM2_BRAFL	C3XZ40	C3ZTM2	Uncharacterized protein.	Nuclear receptor domain-containing protein.	0.520
C3XZ40_BRAFL	C3ZXX6_BRAFL	C3XZ40	C3ZXX6	Uncharacterized protein.	Uncharacterized protein.	0.431
C3Y1H6_BRAFL	C3YBZ4_BRAFL	C3Y1H6	C3YBZ4	Uncharacterized protein.	ASH domain-containing protein.	0.414
C3Y1H7_BRAFL	C3XUL0_BRAFL	C3Y1H7	C3XUL0	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.402
C3Y1H7_BRAFL	C3Y1H8_BRAFL	C3Y1H7	C3Y1H8	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.542
C3Y1H7_BRAFL	C3Y256_BRAFL	C3Y1H7	C3Y256	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.472
C3Y1H7_BRAFL	C3YF46_BRAFL	C3Y1H7	C3YF46	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.524
C3Y1H7_BRAFL	C3YIE4_BRAFL	C3Y1H7	C3YIE4	WD_REPEATS_REGION domain-containing protein.	Calponin-homology (CH) domain-containing protein.	0.424