(5 nodes) Uracil binding, and Got1/Sft2-like family network (Latimeria chalumnae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	UMPS	Uridine monophosphate synthetase. (290 aa)
	CYB5RL	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. (312 aa)
	H3ACR0_LATCH	Uncharacterized protein. (151 aa)
	GOLT1B	Golgi transport 1B. (138 aa)
	DPYD	Pyr_redox_2 domain-containing protein. (333 aa)

Your Current Organism:

Latimeria chalumnae

NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CYB5RL	DPYD	ENSLACP00000005720	ENSLACP00000012665	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	Pyr_redox_2 domain-containing protein.	0.902
CYB5RL	GOLT1B	ENSLACP00000005720	ENSLACP00000012639	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	Golgi transport 1B.	0.792
CYB5RL	H3ACR0_LATCH	ENSLACP00000005720	ENSLACP00000007431	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	Uncharacterized protein.	0.902
CYB5RL	UMPS	ENSLACP00000005720	ENSLACP00000000039	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	Uridine monophosphate synthetase.	0.903
DPYD	CYB5RL	ENSLACP00000012665	ENSLACP00000005720	Pyr_redox_2 domain-containing protein.	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	0.902
DPYD	GOLT1B	ENSLACP00000012665	ENSLACP00000012639	Pyr_redox_2 domain-containing protein.	Golgi transport 1B.	0.993
DPYD	H3ACR0_LATCH	ENSLACP00000012665	ENSLACP00000007431	Pyr_redox_2 domain-containing protein.	Uncharacterized protein.	0.922
DPYD	UMPS	ENSLACP00000012665	ENSLACP00000000039	Pyr_redox_2 domain-containing protein.	Uridine monophosphate synthetase.	0.999
GOLT1B	CYB5RL	ENSLACP00000012639	ENSLACP00000005720	Golgi transport 1B.	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	0.792
GOLT1B	DPYD	ENSLACP00000012639	ENSLACP00000012665	Golgi transport 1B.	Pyr_redox_2 domain-containing protein.	0.993
GOLT1B	H3ACR0_LATCH	ENSLACP00000012639	ENSLACP00000007431	Golgi transport 1B.	Uncharacterized protein.	0.993
GOLT1B	UMPS	ENSLACP00000012639	ENSLACP00000000039	Golgi transport 1B.	Uridine monophosphate synthetase.	0.999
H3ACR0_LATCH	CYB5RL	ENSLACP00000007431	ENSLACP00000005720	Uncharacterized protein.	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	0.902
H3ACR0_LATCH	DPYD	ENSLACP00000007431	ENSLACP00000012665	Uncharacterized protein.	Pyr_redox_2 domain-containing protein.	0.922
H3ACR0_LATCH	GOLT1B	ENSLACP00000007431	ENSLACP00000012639	Uncharacterized protein.	Golgi transport 1B.	0.993
H3ACR0_LATCH	UMPS	ENSLACP00000007431	ENSLACP00000000039	Uncharacterized protein.	Uridine monophosphate synthetase.	0.993
UMPS	CYB5RL	ENSLACP00000000039	ENSLACP00000005720	Uridine monophosphate synthetase.	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	0.903
UMPS	DPYD	ENSLACP00000000039	ENSLACP00000012665	Uridine monophosphate synthetase.	Pyr_redox_2 domain-containing protein.	0.999
UMPS	GOLT1B	ENSLACP00000000039	ENSLACP00000012639	Uridine monophosphate synthetase.	Golgi transport 1B.	0.999
UMPS	H3ACR0_LATCH	ENSLACP00000000039	ENSLACP00000007431	Uridine monophosphate synthetase.	Uncharacterized protein.	0.993