STRINGSTRING
cog8 cog8 vps50-2 vps50-2 cog2 cog2 eipr1 eipr1 cog4 cog4 cog7 cog7 vps51 vps51 vps50 vps50 vps53 vps53 cog5 cog5 ccdc186 ccdc186 cog6 cog6 vps54 vps54 cog3 cog3 cog1 cog1 vps52 vps52
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cog8Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family. (634 aa)
vps50-2VPS50 EARP/GARPII complex subunit. (314 aa)
cog2Component of oligomeric golgi complex 2. (730 aa)
eipr1EARP-interacting protein homolog; Belongs to the WD repeat EIPR1 family. (391 aa)
cog4Conserved oligomeric Golgi complex subunit 4; Required for normal Golgi function. Plays a role in the vesicular trafficking between the endoplasmic reticulum and the Golgi apparatus (By similarity); Belongs to the COG4 family. (781 aa)
cog7Component of oligomeric golgi complex 7. (733 aa)
vps51Vacuolar protein sorting-associated protein 51 homolog; Involved in retrograde transport from early and late endosomes to the late Golgi. The GARP complex is required for the maintenance of protein retrieval from endosomes to the TGN, acid hydrolase sorting, lysosome function, endosomal cholesterol traffic and autophagy. Acts as component of the EARP complex that is involved in endocytic recycling (By similarity). (827 aa)
vps50VPS50 EARP/GARPII complex subunit. (965 aa)
vps53VPS53 subunit of GARP complex. (832 aa)
cog5Component of oligomeric golgi complex 5. (165 aa)
ccdc186Si:ch211-225b10.4. (955 aa)
cog6Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function. (654 aa)
vps54VPS54 subunit of GARP complex. (1031 aa)
cog3Component of oligomeric golgi complex 3. (821 aa)
cog1Component of oligomeric golgi complex 1. (937 aa)
vps52VPS52 subunit of GARP complex. (724 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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