Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| adarb2 | alyref | ENSDARP00000115372 | ENSDARP00000139993 | Adenosine deaminase RNA-specific B2 (inactive). | Aly/REF export factor. | 0.942 |
| adarb2 | hnrnpa1b | ENSDARP00000115372 | ENSDARP00000053266 | Adenosine deaminase RNA-specific B2 (inactive). | Heterogeneous nuclear ribonucleoprotein A1b. | 0.894 |
| adarb2 | hnrnpk | ENSDARP00000115372 | ENSDARP00000144257 | Adenosine deaminase RNA-specific B2 (inactive). | Heterogeneous nuclear ribonucleoprotein K. | 0.444 |
| adarb2 | puraa | ENSDARP00000115372 | ENSDARP00000101909 | Adenosine deaminase RNA-specific B2 (inactive). | Purine-rich element-binding protein Aa. | 0.984 |
| adarb2 | smcr8b | ENSDARP00000115372 | ENSDARP00000005452 | Adenosine deaminase RNA-specific B2 (inactive). | Guanine nucleotide exchange protein smcr8b; Component of the C9orf72-SMCR8 complex, a complex that has guanine nucleotide exchange factor (GEF) activity and regulates autophagy. In the complex, C9orf72 and SMCR8 probably constitute the catalytic subunits that promote the exchange of GDP to GTP, converting inactive GDP-bound RAB8A and RAB39B into their active GTP-bound form, thereby promoting autophagosome maturation. The C9orf72-SMCR8 complex also acts as a negative regulator of autophagy initiation by interacting with the ATG1/ULK1 kinase complex and inhibiting its protein kinase activity. | 0.444 |
| adarb2 | srsf2a | ENSDARP00000115372 | ENSDARP00000074623 | Adenosine deaminase RNA-specific B2 (inactive). | Serine and arginine-rich-splicing factor 2a. | 0.892 |
| alyref | adarb2 | ENSDARP00000139993 | ENSDARP00000115372 | Aly/REF export factor. | Adenosine deaminase RNA-specific B2 (inactive). | 0.942 |
| alyref | hnrnpa1b | ENSDARP00000139993 | ENSDARP00000053266 | Aly/REF export factor. | Heterogeneous nuclear ribonucleoprotein A1b. | 0.703 |
| alyref | hnrnpk | ENSDARP00000139993 | ENSDARP00000144257 | Aly/REF export factor. | Heterogeneous nuclear ribonucleoprotein K. | 0.690 |
| alyref | hnrnpub | ENSDARP00000139993 | ENSDARP00000112099 | Aly/REF export factor. | Heterogeneous nuclear ribonucleoprotein Ub. | 0.445 |
| alyref | puraa | ENSDARP00000139993 | ENSDARP00000101909 | Aly/REF export factor. | Purine-rich element-binding protein Aa. | 0.926 |
| alyref | rae1 | ENSDARP00000139993 | ENSDARP00000015105 | Aly/REF export factor. | mRNA export factor; Plays a role in mitotic bipolar spindle formation. Binds mRNA. May function in nucleocytoplasmic transport and in directly or indirectly attaching cytoplasmic mRNPs to the cytoskeleton. Belongs to the WD repeat rae1 family. | 0.951 |
| alyref | rcc1 | ENSDARP00000139993 | ENSDARP00000054025 | Aly/REF export factor. | Regulator of chromosome condensation 1. | 0.412 |
| alyref | srsf2a | ENSDARP00000139993 | ENSDARP00000074623 | Aly/REF export factor. | Serine and arginine-rich-splicing factor 2a. | 0.951 |
| atg101 | atg13 | ENSDARP00000063543 | ENSDARP00000052323 | Autophagy-related protein 101; Autophagy factor required for autophagosome formation. Belongs to the ATG101 family. | Autophagy-related protein 13; Autophagy factor required for autophagosome formation. Target of the TOR kinase signaling pathway that regulates autophagy through the control of the phosphorylation status of ATG13 and ULK1, and the regulation of the ATG13-ULK1-RB1CC1 complex. | 0.999 |
| atg101 | smcr8b | ENSDARP00000063543 | ENSDARP00000005452 | Autophagy-related protein 101; Autophagy factor required for autophagosome formation. Belongs to the ATG101 family. | Guanine nucleotide exchange protein smcr8b; Component of the C9orf72-SMCR8 complex, a complex that has guanine nucleotide exchange factor (GEF) activity and regulates autophagy. In the complex, C9orf72 and SMCR8 probably constitute the catalytic subunits that promote the exchange of GDP to GTP, converting inactive GDP-bound RAB8A and RAB39B into their active GTP-bound form, thereby promoting autophagosome maturation. The C9orf72-SMCR8 complex also acts as a negative regulator of autophagy initiation by interacting with the ATG1/ULK1 kinase complex and inhibiting its protein kinase activity. | 0.797 |
| atg101 | ulk1b | ENSDARP00000063543 | ENSDARP00000113763 | Autophagy-related protein 101; Autophagy factor required for autophagosome formation. Belongs to the ATG101 family. | Unc-51-like autophagy-activating kinase 1. | 0.994 |
| atg101 | wdr41 | ENSDARP00000063543 | ENSDARP00000107806 | Autophagy-related protein 101; Autophagy factor required for autophagosome formation. Belongs to the ATG101 family. | WD repeat domain 41. | 0.862 |
| atg13 | atg101 | ENSDARP00000052323 | ENSDARP00000063543 | Autophagy-related protein 13; Autophagy factor required for autophagosome formation. Target of the TOR kinase signaling pathway that regulates autophagy through the control of the phosphorylation status of ATG13 and ULK1, and the regulation of the ATG13-ULK1-RB1CC1 complex. | Autophagy-related protein 101; Autophagy factor required for autophagosome formation. Belongs to the ATG101 family. | 0.999 |
| atg13 | bcl2a | ENSDARP00000052323 | ENSDARP00000120749 | Autophagy-related protein 13; Autophagy factor required for autophagosome formation. Target of the TOR kinase signaling pathway that regulates autophagy through the control of the phosphorylation status of ATG13 and ULK1, and the regulation of the ATG13-ULK1-RB1CC1 complex. | B-cell leukemia/lymphoma 2. | 0.450 |
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