STRINGSTRING
smc1a smc1a RBM20 RBM20 ENSFHEP00000014677 ENSFHEP00000014677 pds5b pds5b LOC105939942 LOC105939942
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
smc1aStructural maintenance of chromosomes protein. (1211 aa)
RBM20RNA binding motif protein 20. (1124 aa)
ENSFHEP00000014677Uncharacterized protein. (104 aa)
pds5bPDS5 cohesin associated factor B. (1345 aa)
LOC105939942Nipped-B protein. (2440 aa)
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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