STRINGSTRING
pih1d2 pih1d2 ENSFHEP00000002554 ENSFHEP00000002554 nop56 nop56 bms1 bms1 mrm3 mrm3 eri1 eri1 spata5l1 spata5l1 ltv1 ltv1 rbis rbis LOC105931250 LOC105931250 RPL7A RPL7A ZNHIT6 ZNHIT6 gar1 gar1 mrps11 mrps11 ybey ybey lsm6 lsm6 nol6 nol6 rrnad1 rrnad1 ftsj3 ftsj3 ENSFHEP00000006582 ENSFHEP00000006582 pin4 pin4 pa2g4 pa2g4 ngdn ngdn mak16 mak16 lto1 lto1 snu13 snu13 pih1d1 pih1d1 ddx27 ddx27 rrp7a rrp7a wdr36 wdr36 zcchc4 zcchc4 ngrn ngrn bysl bysl ENSFHEP00000032334 ENSFHEP00000032334 LOC105933656 LOC105933656 exosc2 exosc2 dhx37 dhx37 utp11 utp11 nsun4 nsun4 nsun3 nsun3 ddx56 ddx56 nle1 nle1 nop53 nop53 ENSFHEP00000031662 ENSFHEP00000031662 cul4b cul4b exosc6 exosc6 ddx52 ddx52 rsl1d1 rsl1d1 abcf2 abcf2 bop1 bop1 rpl14 rpl14 nol11 nol11 gtf3a gtf3a ENSFHEP00000030986 ENSFHEP00000030986 LOC105934979 LOC105934979 mrm2 mrm2 nom1 nom1 fam207a fam207a helq helq trmt112 trmt112 rpp30 rpp30 tex10 tex10 RPL5-2 RPL5-2 ENSFHEP00000029567 ENSFHEP00000029567 dhx30 dhx30 LOC105921121 LOC105921121 cunh1orf109 cunh1orf109 wdr18 wdr18 pop7 pop7 ddx28 ddx28 mrpl1 mrpl1 wdr3 wdr3 LOC105935138 LOC105935138 rpl7l1 rpl7l1 ccdc105 ccdc105 nvl nvl ddx47 ddx47 wbp11 wbp11 riok3 riok3 rpf2 rpf2 c1d c1d utp6 utp6 wdr75 wdr75 noc4l noc4l kri1 kri1 rbm34 rbm34 nat10 nat10 ddx31 ddx31 ddx51 ddx51 xrcc5 xrcc5 ENSFHEP00000025906 ENSFHEP00000025906 nop58 nop58 wdr12 wdr12 urb1 urb1 rpusd2 rpusd2 LOC105931547 LOC105931547 utp15 utp15 nop9 nop9 dimt1 dimt1 nsa2 nsa2 noc2l noc2l ENSFHEP00000024133 ENSFHEP00000024133 pak1ip1 pak1ip1 mrpl20 mrpl20 c1qbp c1qbp rpusd1 rpusd1 brix1 brix1 LOC105936825 LOC105936825 rpf1 rpf1 rrp12 rrp12 nop14 nop14 utp20 utp20 npm3 npm3 rplp0 rplp0 mettl5 mettl5 mrps7 mrps7 rexo4 rexo4 tbl3 tbl3 ercc2 ercc2 mrpl44 mrpl44 ebna1bp2 ebna1bp2 exosc8 exosc8 LOC105928959 LOC105928959 ENSFHEP00000021142 ENSFHEP00000021142 nsun5 nsun5 mtrex mtrex mrto4 mrto4 gnl2 gnl2 pop5 pop5 abt1 abt1 LOC105925644 LOC105925644 wdr43 wdr43 rpl35 rpl35 utp25 utp25 riok1 riok1 gnl3 gnl3 sbds sbds prkdc prkdc gemin4 gemin4 nup88 nup88 nop10 nop10 nifk nifk LOC105918539 LOC105918539 rrp36 rrp36 utp18 utp18 ENSFHEP00000017928 ENSFHEP00000017928 znhit2 znhit2 mphosph6 mphosph6 ENSFHEP00000017237 ENSFHEP00000017237 ENSFHEP00000017193 ENSFHEP00000017193 pwp1 pwp1 srfbp1 srfbp1 gtpbp10 gtpbp10 ddx54 ddx54 rpl7 rpl7 ENSFHEP00000016354 ENSFHEP00000016354 fcf1 fcf1 nol8 nol8 ENSFHEP00000016268 ENSFHEP00000016268 eif6 eif6 EFL1 EFL1 SPATA5 SPATA5 LOC105925237 LOC105925237 LOC105926354 LOC105926354 rpl23a rpl23a nhp2 nhp2 imp3 imp3 ENSFHEP00000015303 ENSFHEP00000015303 utp4 utp4 nmd3 nmd3 nop16 nop16 grwd1 grwd1 mpv17l2 mpv17l2 mrpl22 mrpl22 LOC105922342 LOC105922342 ENSFHEP00000014619 ENSFHEP00000014619 bud23 bud23 LOC105918637 LOC105918637 malsu1 malsu1 LOC105929184 LOC105929184 rps25 rps25 LOC105927446 LOC105927446 krr1 krr1 LOC105937844 LOC105937844 LOC105916948 LOC105916948 esf1 esf1 ENSFHEP00000013408 ENSFHEP00000013408 nop2 nop2 ENSFHEP00000012848 ENSFHEP00000012848 ENSFHEP00000012797 ENSFHEP00000012797 wdr55 wdr55 rpp38 rpp38 exosc4 exosc4 eri2 eri2 rrp9 rrp9 ENSFHEP00000011888 ENSFHEP00000011888 mterf3 mterf3 ENSFHEP00000011725 ENSFHEP00000011725 pes1 pes1 gtpbp4 gtpbp4 pop4 pop4 LOC105932770 LOC105932770 LOC105919370 LOC105919370 heatr3 heatr3 eral1 eral1 rps19 rps19 rpl10 rpl10 ddx10 ddx10 rcl1 rcl1 RPL5 RPL5 rsl24d1 rsl24d1 riok2 riok2 fbl fbl exosc10 exosc10 frg1 frg1 UTP14C UTP14C SART1 SART1 dcaf13 dcaf13 rpsa rpsa LOC105933792 LOC105933792 exosc7 exosc7 LOC105931573 LOC105931573 ENSFHEP00000008148 ENSFHEP00000008148 znhit3 znhit3 LOC105919467 LOC105919467 rps5 rps5 LOC105931067 LOC105931067 rpl6 rpl6 nol10 nol10 nip7 nip7 utp23 utp23 exosc3 exosc3 LOC105922728 LOC105922728 tfb1m tfb1m tsr3 tsr3 pdcd11 pdcd11 dhx29 dhx29 imp4 imp4 trmt2b trmt2b rpp40 rpp40 wdr74 wdr74 LOC105928521 LOC105928521 traf7 traf7 LOC105931923 LOC105931923 fastkd2 fastkd2 ENSFHEP00000032939 ENSFHEP00000032939 tsr2 tsr2 tfb2m tfb2m ddx21 ddx21 ENSFHEP00000032520 ENSFHEP00000032520 mettl15 mettl15 mphosph10 mphosph10 mettl17 mettl17 dkc1 dkc1 cinp cinp LOC105927159 LOC105927159 lyar lyar sdad1 sdad1 dlx2 dlx2 drosha drosha lsg1 lsg1 nol9 nol9 tsr1 tsr1 wdr46 wdr46
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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pih1d2PIH1 domain containing 2. (320 aa)
ENSFHEP00000002554Mitochondrial ribosome-associated GTPase 2. (348 aa)
nop56NOP56 ribonucleoprotein homolog. (561 aa)
bms1BMS1 ribosome biogenesis factor. (1184 aa)
mrm3Mitochondrial rRNA methyltransferase 3a. (451 aa)
eri1Exoribonuclease 1. (350 aa)
spata5l1Spermatogenesis associated 5-like 1. (748 aa)
ltv1LTV1 ribosome biogenesis factor. (473 aa)
rbisSi:ch211-282b22.1. (101 aa)
LOC105931250Exportin 1 (CRM1 homolog, yeast) a. (1066 aa)
RPL7ARibosomal protein L7a. (266 aa)
ZNHIT6Zinc finger HIT-type containing 6. (419 aa)
gar1H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (214 aa)
mrps11Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family. (195 aa)
ybeyYbeY metalloendoribonuclease. (168 aa)
lsm6LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated. (80 aa)
nol6Nucleolar protein 6. (1147 aa)
rrnad1Ribosomal RNA adenine dimethylase domain containing 1. (570 aa)
ftsj3pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (844 aa)
ENSFHEP00000006582RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family. (391 aa)
pin4Peptidyl-prolyl cis-trans isomerase. (151 aa)
pa2g4Proliferation-associated 2G4, a. (391 aa)
ngdnNeuroguidin, EIF4E binding protein. (318 aa)
mak16Protein MAK16 homolog; Belongs to the MAK16 family. (301 aa)
lto1LTO1 maturation factor of ABCE1. (171 aa)
snu13Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
pih1d1PIH1 domain containing 1. (285 aa)
ddx27DEAD (Asp-Glu-Ala-Asp) box polypeptide 27; Belongs to the DEAD box helicase family. (634 aa)
rrp7aRibosomal RNA processing 7 homolog A. (292 aa)
wdr36WD repeat domain 36. (704 aa)
zcchc4Zinc finger CCHC domain-containing protein 4. (491 aa)
ngrnNeugrin, neurite outgrowth associated. (298 aa)
byslBystin-like. (443 aa)
ENSFHEP00000032334Uncharacterized protein. (314 aa)
LOC105933656UTP3 small subunit processome component. (499 aa)
exosc2Exosome component 2. (298 aa)
dhx37ATP-dependent RNA helicase DHX37, putative. (1149 aa)
utp11U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (251 aa)
nsun4NOP2/Sun RNA methyltransferase 4; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (446 aa)
nsun3NOP2/Sun RNA methyltransferase 3; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (454 aa)
ddx56DEAD (Asp-Glu-Ala-Asp) box helicase 56. (540 aa)
nle1Notchless homolog 1 (Drosophila). (478 aa)
nop53Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (474 aa)
ENSFHEP00000031662WD_REPEATS_REGION domain-containing protein. (328 aa)
cul4bCullin 4B; Belongs to the cullin family. (868 aa)
exosc6Exosome component 6. (276 aa)
ddx52DEAD (Asp-Glu-Ala-Asp) box polypeptide 52. (655 aa)
rsl1d1Ribosomal L1 domain containing 1. (361 aa)
abcf2ATP-binding cassette, sub-family F (GCN20), member 2b. (612 aa)
bop1Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (602 aa)
rpl14Ribosomal protein L14. (137 aa)
nol11Nucleolar protein 11. (721 aa)
gtf3aGeneral transcription factor IIIA, b. (323 aa)
ENSFHEP00000030986Ferredoxin-fold anticodon binding domain containing 1. (631 aa)
LOC105934979Uncharacterized protein. (229 aa)
mrm2rRNA methyltransferase 2, mitochondrial. (239 aa)
nom1Nucleolar protein with MIF4G domain 1. (828 aa)
fam207aUncharacterized protein. (240 aa)
helqHelicase, POLQ like. (1022 aa)
trmt112tRNA methyltransferase subunit 11-2. (123 aa)
rpp30Ribonuclease P/MRP 30 subunit. (298 aa)
tex10Testis-expressed sequence 10 protein. (941 aa)
RPL5-2Ribosomal protein L5. (299 aa)
ENSFHEP00000029567EMG1 N1-specific pseudouridine methyltransferase. (222 aa)
dhx30DEAH (Asp-Glu-Ala-His) box helicase 30. (1132 aa)
LOC105921121ATP-binding cassette, sub-family E (OABP), member 1. (646 aa)
cunh1orf109C19h1orf109 homolog (H. sapiens). (216 aa)
wdr18WD repeat domain 18. (430 aa)
pop7Ribonuclease P protein subunit p20; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends. Also a component of the MRP ribonuclease complex, which cleaves pre-rRNA sequences. (151 aa)
ddx28ATP-dependent RNA helicase DDX28, putative. (553 aa)
mrpl1Mitochondrial ribosomal protein L1. (320 aa)
wdr3WD repeat domain 3. (991 aa)
LOC10593513840S ribosomal protein S27. (95 aa)
rpl7l1Ribosomal protein L7-like 1. (251 aa)
ccdc105Coiled-coil domain containing 105. (424 aa)
nvlNuclear VCP like. (842 aa)
ddx47DEAD (Asp-Glu-Ala-Asp) box polypeptide 47; Belongs to the DEAD box helicase family. (479 aa)
wbp11WW domain binding protein 11. (710 aa)
riok3Serine/threonine-protein kinase RIO3; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (544 aa)
rpf2Ribosome production factor 2 homolog. (308 aa)
c1dC1D nuclear receptor corepressor. (154 aa)
utp6UTP6 small subunit processome component. (595 aa)
wdr75WD repeat domain 75. (800 aa)
noc4lNucleolar complex associated 4 homolog. (526 aa)
kri1KRI1 homolog. (787 aa)
rbm34RNA binding motif protein 34. (307 aa)
nat10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1035 aa)
ddx31RNA helicase. (735 aa)
ddx51DEAD (Asp-Glu-Ala-Asp) box polypeptide 51; Belongs to the DEAD box helicase family. (610 aa)
xrcc5X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family. (732 aa)
ENSFHEP00000025906DEAD (Asp-Glu-Ala-Asp) box polypeptide 18; Belongs to the DEAD box helicase family. (298 aa)
nop58NOP58 ribonucleoprotein homolog (yeast). (601 aa)
wdr12Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (423 aa)
urb1URB1 ribosome biogenesis homolog. (2168 aa)
rpusd2RNA pseudouridine synthase domain containing 2. (552 aa)
LOC105931547Ribosomal protein L26. (180 aa)
utp15UTP15 small subunit processome component. (528 aa)
nop9Uncharacterized protein. (621 aa)
dimt1rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (306 aa)
nsa2NSA2 ribosome biogenesis homolog (S. cerevisiae). (260 aa)
noc2lNOC2-like nucleolar associated transcriptional repressor. (742 aa)
ENSFHEP00000024133Mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae). (360 aa)
pak1ip1PAK1 interacting protein 1. (363 aa)
mrpl20Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family. (148 aa)
c1qbpComplement component 1, q subcomponent binding protein. (286 aa)
rpusd1RNA pseudouridine synthase domain containing 1. (307 aa)
brix1Brix domain containing 2. (343 aa)
LOC10593682540S ribosomal protein S27. (138 aa)
rpf1Ribosome production factor 1 homolog. (352 aa)
rrp12Ribosomal RNA processing 12 homolog. (1156 aa)
nop14NOP14 nucleolar protein homolog (yeast). (864 aa)
utp20UTP20 small subunit processome component. (2542 aa)
npm3Nucleophosmin/nucleoplasmin, 3. (157 aa)
rplp060S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (315 aa)
mettl5Methyltransferase 5-like protein. (208 aa)
mrps7Mitochondrial ribosomal protein S7. (229 aa)
rexo4REX4 homolog, 3'-5' exonuclease. (400 aa)
tbl3Transducin (beta)-like 3. (955 aa)
ercc2TFIIH basal transcription factor complex helicase XPD subunit. (795 aa)
mrpl44Mitochondrial ribosomal protein L44. (376 aa)
ebna1bp2rRNA-processing protein EBP2, putative. (314 aa)
exosc8Exosome component 8. (277 aa)
LOC105928959Proliferation-associated 2G4, b. (445 aa)
ENSFHEP00000021142Ribonuclease P and MRP subunit p25, b. (242 aa)
nsun5NOP2/Sun RNA methyltransferase 5; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (492 aa)
mtrexMtr4 exosome RNA helicase. (1115 aa)
mrto4Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (235 aa)
gnl2Guanine nucleotide binding protein-like 2 (nucleolar). (549 aa)
pop5Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. (166 aa)
abt1Activator of basal transcription 1. (267 aa)
LOC105925644tRNA methyltransferase 61B. (483 aa)
wdr43WD repeat domain 43. (652 aa)
rpl35Ribosomal protein L35. (123 aa)
utp25UTP25 small subunit processor component. (776 aa)
riok1RIO kinase 1 (yeast). (451 aa)
gnl3Guanine nucleotide binding protein-like 3 (nucleolar). (551 aa)
sbdsSBDS ribosome maturation factor. (249 aa)
prkdcProtein kinase, DNA-activated, catalytic subunit; Belongs to the PI3/PI4-kinase family. (3917 aa)
gemin4Gem (nuclear organelle) associated protein 4. (1109 aa)
nup88Nuclear pore complex protein Nup88. (720 aa)
nop10NOP10 ribonucleoprotein homolog (yeast). (64 aa)
nifkNucleolar protein interacting with the FHA domain of MKI67. (281 aa)
LOC105918539Mitochondrial transcription termination factor 4. (345 aa)
rrp36Ribosomal RNA processing 36. (198 aa)
utp18WD_REPEATS_REGION domain-containing protein. (533 aa)
ENSFHEP00000017928U3snoRNP10 domain-containing protein. (323 aa)
znhit2Zinc finger HIT domain-containing protein 2. (565 aa)
mphosph6M-phase phosphoprotein 6. (163 aa)
ENSFHEP00000017237Exportin 1 (CRM1 homolog, yeast) b. (495 aa)
ENSFHEP00000017193Importin N-terminal domain-containing protein. (290 aa)
pwp1PWP1 homolog, endonuclein. (488 aa)
srfbp1BUD22 domain-containing protein. (561 aa)
gtpbp10GTP-binding protein 10 (putative). (396 aa)
ddx54ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily. (858 aa)
rpl7Ribosomal protein L7. (174 aa)
ENSFHEP00000016354Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family. (116 aa)
fcf1FCF1 rRNA-processing protein. (197 aa)
nol8Uncharacterized protein. (769 aa)
ENSFHEP00000016268RRM domain-containing protein. (97 aa)
eif6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (246 aa)
EFL1Elongation factor like GTPase 1. (1108 aa)
SPATA5Spermatogenesis associated 5. (896 aa)
LOC105925237Zgc:110130. (287 aa)
LOC105926354Si:dkey-12j5.1. (421 aa)
rpl23aRibosomal protein L23a; Belongs to the universal ribosomal protein uL23 family. (155 aa)
nhp2Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (156 aa)
imp3IMP U3 small nucleolar ribonucleoprotein 3. (183 aa)
ENSFHEP0000001530340S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (110 aa)
utp4UTP4 small subunit processome component. (685 aa)
nmd360S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. (504 aa)
nop16NOP16 nucleolar protein homolog (yeast). (177 aa)
grwd1Glutamate-rich WD repeat containing 1. (402 aa)
mpv17l2MPV17 mitochondrial membrane protein-like 2; Belongs to the peroxisomal membrane protein PXMP2/4 family. (218 aa)
mrpl2239S ribosomal protein L22, mitochondrial; Belongs to the universal ribosomal protein uL22 family. (209 aa)
LOC105922342Uncharacterized protein. (894 aa)
ENSFHEP00000014619Uncharacterized protein. (186 aa)
bud23BUD23 rRNA methyltransferase and ribosome maturation factor. (178 aa)
LOC105918637Nuclear assembly factor 1. (467 aa)
malsu1Si:zfos-1192g2.3. (240 aa)
LOC105929184RNA polymerase I and III subunit D. (115 aa)
rps2540S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (123 aa)
LOC105927446TSC complex subunit 1b. (1254 aa)
krr1KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (393 aa)
LOC105937844Uncharacterized protein. (1018 aa)
LOC105916948Proline, glutamate and leucine rich protein 1. (1270 aa)
esf1ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae). (498 aa)
ENSFHEP00000013408Uncharacterized protein. (137 aa)
nop2NOP2 nucleolar protein homolog (yeast); Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (622 aa)
ENSFHEP00000012848EMG1 N1-specific pseudouridine methyltransferase. (157 aa)
ENSFHEP00000012797DEAD (Asp-Glu-Ala-Asp) box helicase 56. (441 aa)
wdr55WD repeat-containing protein 55; Nucleolar protein that acts as a modulator of rRNA synthesis. Plays a central role during organogenesis. Belongs to the WD repeat WDR55 family. (440 aa)
rpp38Ribonuclease P/MRP 38 subunit. (289 aa)
exosc4Exosome component 4. (245 aa)
eri2ERI1 exoribonuclease family member 2. (706 aa)
rrp9Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein. (480 aa)
ENSFHEP00000011888RNase_PH domain-containing protein. (115 aa)
mterf3Mitochondrial transcription termination factor 3. (421 aa)
ENSFHEP00000011725Uncharacterized protein. (344 aa)
pes1Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (538 aa)
gtpbp4Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (634 aa)
pop4Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends. (218 aa)
LOC105932770Si:dkey-208k4.2. (366 aa)
LOC105919370Nucleophosmin 1a. (300 aa)
heatr3HEAT repeat containing 3. (678 aa)
eral1Era-like 12S mitochondrial rRNA chaperone 1. (469 aa)
rps19Ribosomal protein S19. (146 aa)
rpl10Ribosomal protein L10. (215 aa)
ddx10RNA helicase. (810 aa)
rcl1RNA terminal phosphate cyclase-like 1. (413 aa)
RPL5Ribosomal protein L5b. (292 aa)
rsl24d1Ribosomal L24 domain containing 1. (164 aa)
riok2Serine/threonine-protein kinase RIO2. (515 aa)
fblFibrillarin. (316 aa)
exosc10Exosome component 10. (889 aa)
frg1FSHD region gene 1. (254 aa)
UTP14CUTP14C small subunit processome component. (779 aa)
SART1Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP. (773 aa)
dcaf13Ddb1 and cul4 associated factor 13. (445 aa)
rpsa40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family. (307 aa)
LOC105933792Cullin 4A; Belongs to the cullin family. (653 aa)
exosc7Exosome component 7. (291 aa)
LOC105931573ZP domain-containing protein. (486 aa)
ENSFHEP00000008148Uncharacterized protein. (129 aa)
znhit3HIT-type domain-containing protein. (145 aa)
LOC105919467TSC complex subunit 1. (1034 aa)
rps5Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (203 aa)
LOC105931067PWP2 small subunit processome component. (862 aa)
rpl6Ribosomal protein L6. (259 aa)
nol10Nucleolar protein 10. (742 aa)
nip760S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (179 aa)
utp23UTP23 small subunit processome component. (252 aa)
exosc3Exosome component 3. (301 aa)
LOC105922728DEAD (Asp-Glu-Ala-Asp) box polypeptide 18; Belongs to the DEAD box helicase family. (453 aa)
tfb1mrRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (352 aa)
tsr3Probable ribosome biogenesis protein; Probable pre-rRNA processing protein involved in ribosome biogenesis. (291 aa)
pdcd11Programmed cell death 11. (1769 aa)
dhx29ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily. (1389 aa)
imp4IMP U3 small nucleolar ribonucleoprotein 4. (291 aa)
trmt2btRNA (Uracil(54)-C(5))-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. (531 aa)
rpp40Ribonuclease P/MRP 40 subunit. (391 aa)
wdr74WD repeat domain 74. (373 aa)
LOC10592852140S ribosomal protein S27. (133 aa)
traf7TNF receptor-associated factor 7. (637 aa)
LOC105931923Nucleophosmin 1b. (299 aa)
fastkd2FAST kinase domains 2. (662 aa)
ENSFHEP00000032939BP28CT domain-containing protein. (348 aa)
tsr2Uncharacterized protein. (205 aa)
tfb2mrRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (447 aa)
ddx21DEAD (Asp-Glu-Ala-Asp) box helicase 21. (774 aa)
ENSFHEP00000032520Ribosomal RNA processing 15 homolog. (260 aa)
mettl15Methyltransferase like 15. (388 aa)
mphosph10U3 small nucleolar ribonucleoprotein protein MPP10; Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing; Belongs to the MPP10 family. (677 aa)
mettl17Methyltransferase like 17. (459 aa)
dkc1Dyskeratosis congenita 1, dyskerin. (533 aa)
cinpCyclin-dependent kinase 2-interacting protein. (221 aa)
LOC105927159RNA pseudouridine synthase D4. (385 aa)
lyarLy1 antibody reactive. (333 aa)
sdad1Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (683 aa)
dlx2Distal-less homeobox 2b. (278 aa)
droshaDrosha ribonuclease III. (1183 aa)
lsg1Large 60S subunit nuclear export GTPase 1. (633 aa)
nol9Nucleolar protein 9. (695 aa)
tsr1TSR1 ribosome maturation factor. (836 aa)
wdr46WD repeat domain 46. (567 aa)
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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