(13 nodes) Pre-ATP-grasp domain superfamily network (Fundulus heteroclitus)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC105928811	Synapsin I. (449 aa)
	SYN2	Synapsin II. (561 aa)
	LOC105927771	Acetyl-CoA carboxylase alpha. (2337 aa)
	mccc1	Methylcrotonoyl-CoA carboxylase 1 (alpha). (698 aa)
	cad	Carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase. (2160 aa)
	pcca	Propionyl-CoA carboxylase subunit alpha. (711 aa)
	cps1	Carbamoyl-phosphate synthase 1, mitochondrial. (1382 aa)
	LOC105932288	Synapsin IIa. (467 aa)
	pc	Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. (1131 aa)
	acacb	Acetyl-CoA carboxylase beta. (2298 aa)
	gss	Glutathione synthetase. (479 aa)
	syn3	Uncharacterized protein. (521 aa)
	gart	Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family. (1014 aa)

Your Current Organism:

Fundulus heteroclitus

NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC105927771	acacb	ENSFHEP00000002430	ENSFHEP00000028758	Acetyl-CoA carboxylase alpha.	Acetyl-CoA carboxylase beta.	0.953
LOC105927771	cad	ENSFHEP00000002430	ENSFHEP00000009038	Acetyl-CoA carboxylase alpha.	Carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase.	0.698
LOC105927771	cps1	ENSFHEP00000002430	ENSFHEP00000010650	Acetyl-CoA carboxylase alpha.	Carbamoyl-phosphate synthase 1, mitochondrial.	0.698
LOC105927771	gart	ENSFHEP00000002430	ENSFHEP00000032372	Acetyl-CoA carboxylase alpha.	Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.	0.944
LOC105927771	mccc1	ENSFHEP00000002430	ENSFHEP00000002486	Acetyl-CoA carboxylase alpha.	Methylcrotonoyl-CoA carboxylase 1 (alpha).	0.839
LOC105927771	pc	ENSFHEP00000002430	ENSFHEP00000027060	Acetyl-CoA carboxylase alpha.	Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.	0.885
LOC105927771	pcca	ENSFHEP00000002430	ENSFHEP00000010428	Acetyl-CoA carboxylase alpha.	Propionyl-CoA carboxylase subunit alpha.	0.839
acacb	LOC105927771	ENSFHEP00000028758	ENSFHEP00000002430	Acetyl-CoA carboxylase beta.	Acetyl-CoA carboxylase alpha.	0.953
acacb	cad	ENSFHEP00000028758	ENSFHEP00000009038	Acetyl-CoA carboxylase beta.	Carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase.	0.698
acacb	cps1	ENSFHEP00000028758	ENSFHEP00000010650	Acetyl-CoA carboxylase beta.	Carbamoyl-phosphate synthase 1, mitochondrial.	0.698
acacb	gart	ENSFHEP00000028758	ENSFHEP00000032372	Acetyl-CoA carboxylase beta.	Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.	0.944
acacb	mccc1	ENSFHEP00000028758	ENSFHEP00000002486	Acetyl-CoA carboxylase beta.	Methylcrotonoyl-CoA carboxylase 1 (alpha).	0.839
acacb	pc	ENSFHEP00000028758	ENSFHEP00000027060	Acetyl-CoA carboxylase beta.	Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.	0.885
acacb	pcca	ENSFHEP00000028758	ENSFHEP00000010428	Acetyl-CoA carboxylase beta.	Propionyl-CoA carboxylase subunit alpha.	0.839
cad	LOC105927771	ENSFHEP00000009038	ENSFHEP00000002430	Carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase.	Acetyl-CoA carboxylase alpha.	0.698
cad	acacb	ENSFHEP00000009038	ENSFHEP00000028758	Carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase.	Acetyl-CoA carboxylase beta.	0.698
cad	cps1	ENSFHEP00000009038	ENSFHEP00000010650	Carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase.	Carbamoyl-phosphate synthase 1, mitochondrial.	0.949
cad	gart	ENSFHEP00000009038	ENSFHEP00000032372	Carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase.	Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.	0.949
cad	mccc1	ENSFHEP00000009038	ENSFHEP00000002486	Carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase.	Methylcrotonoyl-CoA carboxylase 1 (alpha).	0.633
cad	pcca	ENSFHEP00000009038	ENSFHEP00000010428	Carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase.	Propionyl-CoA carboxylase subunit alpha.	0.633