(23 nodes) ClpP/crotonase-like domain superfamily network (Fundulus heteroclitus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	echdc2	Enoyl CoA hydratase domain containing 2; Belongs to the enoyl-CoA hydratase/isomerase family. (332 aa)
	hadha	Hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b. (695 aa)
	LOC105927771	Acetyl-CoA carboxylase alpha. (2337 aa)
	ECHDC1	Ethylmalonyl-CoA decarboxylase 1; Belongs to the enoyl-CoA hydratase/isomerase family. (382 aa)
	ENSFHEP00000004177	Enoyl CoA hydratase, short chain, 1, mitochondrial. (254 aa)
	ech1	Enoyl CoA hydratase 1, peroxisomal. (310 aa)
	LOC105920747	Enoyl-CoA delta isomerase 2. (386 aa)
	LOC105916545	Si:ch211-198n5.11. (628 aa)
	hibch	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family. (373 aa)
	ENSFHEP00000013749	Uncharacterized protein. (204 aa)
	rbp3	Retinol binding protein 3. (617 aa)
	ENSFHEP00000015734	Interphotoreceptor retinoid-binding protein like. (899 aa)
	pccb	Propionyl-CoA carboxylase subunit beta. (562 aa)
	CDYL2	Chromodomain Y like 2. (511 aa)
	clpp	ATP-dependent Clp protease proteolytic subunit. (273 aa)
	mccc2	Methylcrotonoyl-CoA carboxylase 2 (beta). (564 aa)
	ENSFHEP00000025839	Enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase. (622 aa)
	LOC105920656	Ethylmalonyl-CoA decarboxylase; Belongs to the enoyl-CoA hydratase/isomerase family. (307 aa)
	eci1	Enoyl-CoA delta isomerase 1; Belongs to the enoyl-CoA hydratase/isomerase family. (290 aa)
	ECHDC3	Enoyl-CoA hydratase domain-containing protein 3, mitochondrial. (302 aa)
	acacb	Acetyl-CoA carboxylase beta. (2298 aa)
	auh	AU RNA binding protein/enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (271 aa)
	cdyl	Chromodomain protein, Y-like. (551 aa)

Your Current Organism:

Fundulus heteroclitus

NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDYL2	ECHDC1	ENSFHEP00000019063	ENSFHEP00000002729	Chromodomain Y like 2.	Ethylmalonyl-CoA decarboxylase 1; Belongs to the enoyl-CoA hydratase/isomerase family.	0.722
CDYL2	ECHDC3	ENSFHEP00000019063	ENSFHEP00000027242	Chromodomain Y like 2.	Enoyl-CoA hydratase domain-containing protein 3, mitochondrial.	0.400
CDYL2	ENSFHEP00000004177	ENSFHEP00000019063	ENSFHEP00000004177	Chromodomain Y like 2.	Enoyl CoA hydratase, short chain, 1, mitochondrial.	0.678
CDYL2	ENSFHEP00000013749	ENSFHEP00000019063	ENSFHEP00000013749	Chromodomain Y like 2.	Uncharacterized protein.	0.516
CDYL2	ENSFHEP00000025839	ENSFHEP00000019063	ENSFHEP00000025839	Chromodomain Y like 2.	Enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase.	0.663
CDYL2	LOC105916545	ENSFHEP00000019063	ENSFHEP00000008557	Chromodomain Y like 2.	Si:ch211-198n5.11.	0.688
CDYL2	LOC105920656	ENSFHEP00000019063	ENSFHEP00000026530	Chromodomain Y like 2.	Ethylmalonyl-CoA decarboxylase; Belongs to the enoyl-CoA hydratase/isomerase family.	0.669
CDYL2	LOC105920747	ENSFHEP00000019063	ENSFHEP00000006284	Chromodomain Y like 2.	Enoyl-CoA delta isomerase 2.	0.687
CDYL2	LOC105927771	ENSFHEP00000019063	ENSFHEP00000002430	Chromodomain Y like 2.	Acetyl-CoA carboxylase alpha.	0.631
CDYL2	acacb	ENSFHEP00000019063	ENSFHEP00000028758	Chromodomain Y like 2.	Acetyl-CoA carboxylase beta.	0.631
CDYL2	auh	ENSFHEP00000019063	ENSFHEP00000028945	Chromodomain Y like 2.	AU RNA binding protein/enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.	0.600
CDYL2	cdyl	ENSFHEP00000019063	ENSFHEP00000033982	Chromodomain Y like 2.	Chromodomain protein, Y-like.	0.655
CDYL2	ech1	ENSFHEP00000019063	ENSFHEP00000005903	Chromodomain Y like 2.	Enoyl CoA hydratase 1, peroxisomal.	0.866
CDYL2	echdc2	ENSFHEP00000019063	ENSFHEP00000000198	Chromodomain Y like 2.	Enoyl CoA hydratase domain containing 2; Belongs to the enoyl-CoA hydratase/isomerase family.	0.600
CDYL2	eci1	ENSFHEP00000019063	ENSFHEP00000018780	Chromodomain Y like 2.	Enoyl-CoA delta isomerase 1; Belongs to the enoyl-CoA hydratase/isomerase family.	0.663
CDYL2	hadha	ENSFHEP00000019063	ENSFHEP00000000654	Chromodomain Y like 2.	Hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b.	0.663
CDYL2	hibch	ENSFHEP00000019063	ENSFHEP00000009586	Chromodomain Y like 2.	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family.	0.697
CDYL2	mccc2	ENSFHEP00000019063	ENSFHEP00000023556	Chromodomain Y like 2.	Methylcrotonoyl-CoA carboxylase 2 (beta).	0.688
CDYL2	pccb	ENSFHEP00000019063	ENSFHEP00000016065	Chromodomain Y like 2.	Propionyl-CoA carboxylase subunit beta.	0.688
ECHDC1	CDYL2	ENSFHEP00000002729	ENSFHEP00000019063	Ethylmalonyl-CoA decarboxylase 1; Belongs to the enoyl-CoA hydratase/isomerase family.	Chromodomain Y like 2.	0.722