STRINGSTRING
LOC103479412 LOC103479412 ercc2 ercc2 batf batf SRF SRF Tal1 Tal1 LOC103473440 LOC103473440 ufl1 ufl1 pdgfrb pdgfrb rspo1 rspo1 notch1 notch1 srf srf xrcc5 xrcc5 meox1 meox1 sh2b3 sh2b3 fev fev Mib1 Mib1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103479412T-cell acute lymphocytic leukemia 1. (394 aa)
ercc2Excision repair cross-complementation group 2. (655 aa)
batfBasic leucine zipper transcription factor, ATF-like. (124 aa)
SRFSerum response factor. (243 aa)
Tal1BHLH domain-containing protein. (124 aa)
LOC103473440Notch receptor 1a. (2478 aa)
ufl1UFM1-specific ligase 1. (792 aa)
pdgfrbPlatelet-derived growth factor receptor, beta polypeptide; Belongs to the protein kinase superfamily. Tyr protein kinase family. (1040 aa)
rspo1R-spondin 1. (273 aa)
notch1Notch receptor 1b. (2491 aa)
srfSerum response factor b. (570 aa)
xrcc5X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family. (731 aa)
meox1Mesenchyme homeobox 1. (265 aa)
sh2b3SH2B adaptor protein 3. (710 aa)
fevETS domain-containing protein. (220 aa)
Mib1Mindbomb E3 ubiquitin protein ligase 1. (994 aa)
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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