STRINGSTRING
msx1 msx1 LOC103478926 LOC103478926 sgpl1 sgpl1 lef1 lef1 EDNRA EDNRA SRF SRF bbs4 bbs4 mkks mkks srf srf zfand5 zfand5 tgfb3 tgfb3 LOC103463616 LOC103463616 pitx2 pitx2 ENSPREP00000016424 ENSPREP00000016424 LOC103460964 LOC103460964 LOC103476799 LOC103476799 plekha1 plekha1 specc1l specc1l LOC103468460 LOC103468460 LOC103475119 LOC103475119 ENSPREP00000028482 ENSPREP00000028482 TGFB3 TGFB3 LOC103473941 LOC103473941 LOC103482005 LOC103482005 LOC103456557 LOC103456557 csrnp1 csrnp1 LOC103458597 LOC103458597 ankrd11 ankrd11 crispld2 crispld2 LOC103471340 LOC103471340
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
msx1Muscle segment homeobox 1a. (281 aa)
LOC103478926Cysteine-rich secretory protein LCCL domain containing 1b. (509 aa)
sgpl1Sphingosine-1-phosphate lyase 1. (565 aa)
lef1Lymphoid enhancer-binding factor 1. (422 aa)
EDNRAEndothelin receptor type A; Belongs to the G-protein coupled receptor 1 family. (372 aa)
SRFSerum response factor. (243 aa)
bbs4Bardet-Biedl syndrome 4. (520 aa)
mkksMcKusick-Kaufman syndrome. (576 aa)
srfSerum response factor b. (570 aa)
zfand5Zinc finger, AN1-type domain 5a. (208 aa)
tgfb3Transforming growth factor beta; Belongs to the TGF-beta family. (408 aa)
LOC103463616Zgc:77486. (198 aa)
pitx2Homeobox protein. (312 aa)
ENSPREP00000016424Asp-B-Hydro_N domain-containing protein. (429 aa)
LOC103460964Cysteine-rich secretory protein LCCL domain containing 1a. (328 aa)
LOC103476799Dickkopf WNT signaling pathway inhibitor 1a. (242 aa)
plekha1Pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1b. (333 aa)
specc1lSperm antigen with calponin homology and coiled-coil domains 1-like a. (1156 aa)
LOC103468460E1A binding protein p300 b. (2737 aa)
LOC103475119Transforming growth factor beta; Belongs to the TGF-beta family. (380 aa)
ENSPREP00000028482Uncharacterized protein. (587 aa)
TGFB3Transforming growth factor beta; Belongs to the TGF-beta family. (407 aa)
LOC103473941Uncharacterized protein. (228 aa)
LOC103482005E1A binding protein p300 a. (2743 aa)
LOC103456557Cysteine-serine-rich nuclear protein 1b. (570 aa)
csrnp1Cysteine-serine-rich nuclear protein 1a. (586 aa)
LOC103458597Si:ch211-195o20.7. (595 aa)
ankrd11Ankyrin repeat domain 11. (2822 aa)
crispld2Cysteine-rich secretory protein LCCL domain containing 2. (496 aa)
LOC103471340Endothelin receptor type Aa; Belongs to the G-protein coupled receptor 1 family. (440 aa)
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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