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CED56686.1 CED56686.1 CED56936.1 CED56936.1 CED57260.1 CED57260.1 CED71386.1 CED71386.1 mshQ-2 mshQ-2 mshP-2 mshP-2 mshO-2 mshO-2 mshD-2 mshD-2 mshC-2 mshC-2 mshP-3 mshP-3 mshO-3 mshO-3 mshD-3 mshD-3 mshC-3 mshC-3 mshA mshA mshB mshB mshG mshG mshN mshN mshM mshM mshD-4 mshD-4 mshK mshK mshJ mshJ mshI mshI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CED56686.1Putative secretion protein. (170 aa)
CED56936.1V10 pilin. (173 aa)
CED57260.1Putative uncharacterized protein. (146 aa)
CED71386.1Putative uncharacterized protein. (163 aa)
mshQ-2MSHA biogenesis protein MshQ. (2658 aa)
mshP-2MSHA biogenesis protein MshP. (136 aa)
mshO-2MSHA biogenesis protein MshO. (262 aa)
mshD-2MSHA pilin protein MshD. (188 aa)
mshC-2MSHA pilin protein MshC. (164 aa)
mshP-3Putative exported protein MshP. (145 aa)
mshO-3Putative exported protein MshO. (241 aa)
mshD-3Type IV pilus, MSHA pilin protein MshD. (197 aa)
mshC-3Type IV pilus, MSHA pilin protein MshC. (196 aa)
mshAType IV pilus, MSHA pilin protein MshA. (153 aa)
mshBType IV pilus, MSHA pilin protein MshB. (187 aa)
mshGType IV pilus, MSHA biogenesis protein MshG. (408 aa)
mshNType IV pilus, MSHA biogenesis protein MshN. (370 aa)
mshMType IV pilus, MSHA biogenesis protein MshM. (282 aa)
mshD-4Type IV pilus, MSHA biogenesis protein MshD. (550 aa)
mshKType IV pilus, MSHA biogenesis protein MshK. (110 aa)
mshJType IV pilus, MSHA biogenesis protein MshJ. (212 aa)
mshIType IV pilus, MSHA biogenesis protein MshI. (485 aa)
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
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