STRINGSTRING
pold1 pold1 ENSAPOP00000034731 ENSAPOP00000034731 sirt6 sirt6 rad51 rad51 rcbtb2 rcbtb2 LOC110971723 LOC110971723 mre11 mre11 ube2i ube2i rad1 rad1 top3a top3a RPA1 RPA1 LOC110971106 LOC110971106 ENSAPOP00000031672 ENSAPOP00000031672 ENSAPOP00000031054 ENSAPOP00000031054 LOC110945615 LOC110945615 ENSAPOP00000030945 ENSAPOP00000030945 LOC110964368 LOC110964368 LOC110945936 LOC110945936 pole4 pole4 recql4 recql4 ENSAPOP00000030017 ENSAPOP00000030017 rfc4 rfc4 LOC110957885 LOC110957885 LOC110958398 LOC110958398 hus1 hus1 LOC110946883 LOC110946883 babam2 babam2 atm atm ENSAPOP00000027967 ENSAPOP00000027967 babam1 babam1 uba52 uba52 LOC110947217 LOC110947217 RCBTB1 RCBTB1 sirt7 sirt7 ENSAPOP00000026301 ENSAPOP00000026301 exo1 exo1 RNF169 RNF169 LOC110968155 LOC110968155 abl1 abl1 LOC110966406 LOC110966406 mdc1 mdc1 rad51ap1 rad51ap1 brca1 brca1 LOC110967609 LOC110967609 pias4 pias4 rhno1 rhno1 ccna1 ccna1 SPIDR SPIDR ube2v2 ube2v2 rfc2 rfc2 LOC110954086 LOC110954086 ENSAPOP00000022517 ENSAPOP00000022517 slf1 slf1 ankrd11 ankrd11 topbp1 topbp1 rad52 rad52 polk polk rpa2 rpa2 nbn nbn ENSAPOP00000020364 ENSAPOP00000020364 ENSAPOP00000020269 ENSAPOP00000020269 ENSAPOP00000020171 ENSAPOP00000020171 pold2 pold2 rps27a rps27a pcna pcna rad51d rad51d dna2 dna2 LOC110967845 LOC110967845 ENSAPOP00000017332 ENSAPOP00000017332 ENSAPOP00000016753 ENSAPOP00000016753 sumo2 sumo2 rpa3 rpa3 ENSAPOP00000015997 ENSAPOP00000015997 LOC110946478 LOC110946478 ube2n ube2n pold3 pold3 ENSAPOP00000015596 ENSAPOP00000015596 ENSAPOP00000015519 ENSAPOP00000015519 PPP4C PPP4C LOC110951404 LOC110951404 EME2 EME2 ENSAPOP00000015249 ENSAPOP00000015249 ENSAPOP00000015209 ENSAPOP00000015209 blm blm LOC110966133 LOC110966133 eme1 eme1 LOC110970504 LOC110970504 kat5 kat5 ankrd12 ankrd12 tdrd3 tdrd3 rfc3 rfc3 LOC110945681 LOC110945681 LOC110945714 LOC110945714 cdca7 cdca7 LOC110946759 LOC110946759 ENSAPOP00000012530 ENSAPOP00000012530 rnf8 rnf8 LOC110947992 LOC110947992 meiob meiob ppp4r2 ppp4r2 ENSAPOP00000011452 ENSAPOP00000011452 rad17 rad17 uimc1 uimc1 chek1 chek1 pole2 pole2 ENSAPOP00000010859 ENSAPOP00000010859 rfc5 rfc5 LOC110954465 LOC110954465 ENSAPOP00000010303 ENSAPOP00000010303 LOC110946968 LOC110946968 ENSAPOP00000010123 ENSAPOP00000010123 xrcc3 xrcc3 LOC110948070 LOC110948070 LOC110963330 LOC110963330 ENSAPOP00000008964 ENSAPOP00000008964 rmi1 rmi1 LOC110969388 LOC110969388 ENSAPOP00000008555 ENSAPOP00000008555 atr atr pole pole ENSAPOP00000007491 ENSAPOP00000007491 LOC110970616 LOC110970616 tp53bp1 tp53bp1 LOC110972139 LOC110972139 rfc1 rfc1 ENSAPOP00000005973 ENSAPOP00000005973 ENSAPOP00000005929 ENSAPOP00000005929 cdk2 cdk2 rad9a rad9a timeless timeless LOC110964673 LOC110964673 polh polh xrcc2 xrcc2 pole3 pole3 ENSAPOP00000003675 ENSAPOP00000003675 brca2 brca2 kxd1 kxd1 exd2 exd2 SUMO3 SUMO3 rmi2 rmi2 ccna2 ccna2 ENSAPOP00000001109 ENSAPOP00000001109 tipin tipin ENSAPOP00000000534 ENSAPOP00000000534 rnf168 rnf168 ENSAPOP00000000265 ENSAPOP00000000265
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pold1DNA polymerase. (1104 aa)
ENSAPOP00000034731Uncharacterized protein. (104 aa)
sirt6Sirtuin 6. (286 aa)
rad51DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] (338 aa)
rcbtb2Regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2. (527 aa)
LOC110971723RAD51 paralog C. (346 aa)
mre11Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (672 aa)
ube2iUbiquitin-conjugating enzyme E2Ia; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
rad1RAD1 homolog (S. pombe). (278 aa)
top3aDNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (1026 aa)
RPA1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (691 aa)
LOC110971106Histone H2B; Belongs to the histone H2B family. (118 aa)
ENSAPOP00000031672Histone H2A; Belongs to the histone H2A family. (233 aa)
ENSAPOP00000031054annotation not available (53 aa)
LOC110945615Serine/threonine-protein phosphatase 4 catalytic subunit B. (310 aa)
ENSAPOP00000030945SAE2 domain-containing protein. (74 aa)
LOC110964368Uncharacterized protein. (559 aa)
LOC110945936Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
pole4Polymerase (DNA-directed), epsilon 4, accessory subunit. (128 aa)
recql4RecQ helicase-like 4. (1281 aa)
ENSAPOP00000030017Uncharacterized protein. (401 aa)
rfc4Replication factor C (activator 1) 4. (357 aa)
LOC110957885Protein phosphatase 4, regulatory subunit 2a. (411 aa)
LOC110958398Regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1. (532 aa)
hus1Checkpoint protein; Belongs to the HUS1 family. (250 aa)
LOC110946883CBFD_NFYB_HMF domain-containing protein. (116 aa)
babam2BRISC and BRCA1 A complex member 2. (270 aa)
atmNon-specific serine/threonine protein kinase. (3026 aa)
ENSAPOP00000027967Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (87 aa)
babam1BRISC and BRCA1 A complex member 1. (379 aa)
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
LOC110947217Lys-63-specific deubiquitinase BRCC36. (262 aa)
RCBTB1RCC1 and BTB domain containing protein 1. (531 aa)
sirt7Sirtuin 7. (406 aa)
ENSAPOP00000026301Uncharacterized protein. (145 aa)
exo1Exonuclease 1. (756 aa)
RNF169Ring finger protein 169. (580 aa)
LOC110968155Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. (318 aa)
abl1Tyrosine-protein kinase. (1119 aa)
LOC110966406Small ubiquitin-related modifier. (99 aa)
mdc1Uncharacterized protein. (2156 aa)
rad51ap1RAD51 associated protein 1. (320 aa)
brca1Uncharacterized protein. (1388 aa)
LOC110967609ANK_REP_REGION domain-containing protein. (603 aa)
pias4Protein inhibitor of activated STAT, 4a. (507 aa)
rhno1Si:ch73-352p4.5. (297 aa)
ccna1Cyclin A1; Belongs to the cyclin family. (419 aa)
SPIDRScaffold protein involved in DNA repair. (810 aa)
ube2v2Ubiquitin-conjugating enzyme E2 variant 2. (145 aa)
rfc2Replication factor C (activator 1) 2. (352 aa)
LOC110954086Histone H2B; Belongs to the histone H2B family. (126 aa)
ENSAPOP00000022517Reverse transcriptase domain-containing protein. (206 aa)
slf1SMC5-SMC6 complex localization factor 1. (879 aa)
ankrd11Ankyrin repeat domain 11. (2849 aa)
topbp1DNA topoisomerase II binding protein 1. (1518 aa)
rad52RAD52 homolog, DNA repair protein. (485 aa)
polkPolymerase (DNA directed) kappa. (884 aa)
rpa2Replication protein A2. (294 aa)
nbnNibrin. (854 aa)
ENSAPOP00000020364Uncharacterized protein. (221 aa)
ENSAPOP00000020269Uncharacterized protein; Belongs to the histone H2B family. (120 aa)
ENSAPOP00000020171Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (120 aa)
pold2Polymerase (DNA directed), delta 2, regulatory subunit. (472 aa)
rps27aRibosomal protein S27a. (156 aa)
pcnaProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
rad51dRAD51 paralog D. (333 aa)
dna2DNA replication helicase/nuclease 2. (997 aa)
LOC110967845MUS81 structure-specific endonuclease subunit. (591 aa)
ENSAPOP00000017332BRCA1/BRCA2-containing complex, subunit 3. (281 aa)
ENSAPOP00000016753Nuclear receptor binding SET domain protein 2. (1158 aa)
sumo2Small ubiquitin-related modifier. (95 aa)
rpa3Replication protein A3. (122 aa)
ENSAPOP00000015997annotation not available (120 aa)
LOC110946478DNA polymerase delta subunit 4-like. (108 aa)
ube2nUbiquitin-conjugating enzyme E2Nb; Belongs to the ubiquitin-conjugating enzyme family. (154 aa)
pold3Polymerase (DNA-directed), delta 3, accessory subunit. (446 aa)
ENSAPOP00000015596annotation not available (246 aa)
ENSAPOP00000015519Uncharacterized protein. (53 aa)
PPP4CSerine/threonine-protein phosphatase. (310 aa)
LOC110951404Histone H2B; Belongs to the histone H2B family. (116 aa)
EME2ERCC4 domain-containing protein. (436 aa)
ENSAPOP00000015249Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (132 aa)
ENSAPOP00000015209Uncharacterized protein. (246 aa)
blmBLM RecQ like helicase. (1406 aa)
LOC110966133Serine/threonine-protein phosphatase. (311 aa)
eme1Essential meiotic structure-specific endonuclease 1. (524 aa)
LOC110970504Histone H2A; Belongs to the histone H2A family. (138 aa)
kat5Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (553 aa)
ankrd12Ankyrin repeat domain 12. (1940 aa)
tdrd3Tudor domain containing 3. (788 aa)
rfc3Replication factor C (activator 1) 3. (356 aa)
LOC110945681Histone H2B 1/2-like. (67 aa)
LOC110945714DNA polymerase delta subunit 4-like. (108 aa)
cdca7Cell division cycle associated 7a. (400 aa)
LOC110946759Si:dkey-28b4.7. (108 aa)
ENSAPOP00000012530Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (105 aa)
rnf8E3 ubiquitin-protein ligase RNF8; E3 ubiquitin-protein ligase that plays a key role in DNA damage signaling via 2 distinct roles: by mediating the 'Lys-63'-linked ubiquitination of histones H2A and H2AX and promoting the recruitment of DNA repair proteins at double-strand breaks (DSBs) sites, and by catalyzing 'Lys-48'-linked ubiquitination to remove target proteins from DNA damage sites. Following DNA DSBs, it is recruited to the sites of damage by ATM-phosphorylated MDC1 and catalyzes the 'Lys-63'-linked ubiquitination of histones H2A and H2AX, thereby promoting the formation of TP53 [...] (481 aa)
LOC110947992UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
meiobMethionine sulfoxide reductase B1b. (434 aa)
ppp4r2Protein phosphatase 4, regulatory subunit 2b. (437 aa)
ENSAPOP00000011452RAD50 homolog, double strand break repair protein. (551 aa)
rad17RAD17 checkpoint clamp loader component. (637 aa)
uimc1Uncharacterized protein. (979 aa)
chek1Checkpoint kinase 1; Belongs to the protein kinase superfamily. (460 aa)
pole2DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (536 aa)
ENSAPOP00000010859Histone domain-containing protein; Belongs to the histone H2B family. (109 aa)
rfc5Replication factor C (activator 1) 5. (339 aa)
LOC110954465Small ubiquitin-related modifier. (123 aa)
ENSAPOP00000010303Histone H2B; Belongs to the histone H2B family. (113 aa)
LOC110946968MPN domain-containing protein. (262 aa)
ENSAPOP00000010123Uncharacterized protein. (107 aa)
xrcc3DNA repair protein; Involved in the homologous recombination repair (HRR) pathway of double-stranded DNA, thought to repair chromosomal fragmentation, translocations and deletions; Belongs to the RecA family. RAD51 subfamily. (343 aa)
LOC110948070SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae). (1728 aa)
LOC110963330Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (600 aa)
ENSAPOP00000008964Reverse transcriptase domain-containing protein. (1132 aa)
rmi1RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae). (713 aa)
LOC110969388RAD50 homolog, double strand break repair protein. (545 aa)
ENSAPOP00000008555Histone H2B; Belongs to the histone H2B family. (67 aa)
atrATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. (2407 aa)
poleDNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2101 aa)
ENSAPOP00000007491Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (83 aa)
LOC110970616ERCC4 domain-containing protein. (551 aa)
tp53bp1Tumor protein p53 binding protein, 1. (1705 aa)
LOC110972139Histone domain-containing protein; Belongs to the histone H2B family. (112 aa)
rfc1Replication factor C subunit 1. (1183 aa)
ENSAPOP00000005973Uncharacterized protein. (185 aa)
ENSAPOP00000005929Uncharacterized protein. (157 aa)
cdk2Cyclin-dependent kinase 2; Belongs to the protein kinase superfamily. (298 aa)
rad9aCell cycle checkpoint control protein; Belongs to the rad9 family. (395 aa)
timelessTimeless circadian clock. (1249 aa)
LOC110964673UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
polhPolymerase (DNA directed), eta. (736 aa)
xrcc2RECA_2 domain-containing protein. (290 aa)
pole3Polymerase (DNA directed), epsilon 3 (p17 subunit). (147 aa)
ENSAPOP00000003675Ubiquitin-like domain-containing protein. (84 aa)
brca2BRCA2 DNA repair associated. (2779 aa)
kxd1KxDL motif containing 1. (184 aa)
exd2Exonuclease 3'-5' domain containing 2. (640 aa)
SUMO3Small ubiquitin-related modifier. (94 aa)
rmi2RecQ mediated genome instability 2. (144 aa)
ccna2Cyclin A2; Belongs to the cyclin family. (436 aa)
ENSAPOP00000001109BRISC and BRCA1 A complex member 2. (211 aa)
tipinTIMELESS-interacting protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family. (354 aa)
ENSAPOP00000000534Uncharacterized protein. (166 aa)
rnf168Uncharacterized protein. (303 aa)
ENSAPOP00000000265Chromo_2 domain-containing protein. (549 aa)
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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