(16 nodes) Enoyl-CoA hydratase/isomerase network (Oreochromis niloticus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC100703423	Hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b; Belongs to the enoyl-CoA hydratase/isomerase family. (763 aa)
	CDYL2	Chromodomain Y like 2. (511 aa)
	Echs1	Enoyl CoA hydratase, short chain, 1, mitochondrial; Belongs to the enoyl-CoA hydratase/isomerase family. (401 aa)
	cdyl	Chromodomain protein, Y-like. (560 aa)
	LOC100695384	Zgc:101569; Belongs to the enoyl-CoA hydratase/isomerase family. (310 aa)
	eci2	Enoyl-CoA delta isomerase 2. (397 aa)
	ECHDC3	Enoyl-CoA hydratase domain containing 3. (296 aa)
	ENSONIP00000028816	annotation not available (260 aa)
	LOC100700973	AU RNA binding protein/enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (328 aa)
	ECHDC1	Ethylmalonyl-CoA decarboxylase 1; Belongs to the enoyl-CoA hydratase/isomerase family. (311 aa)
	I3JQQ9_ORENI	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (375 aa)
	hibch	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family. (382 aa)
	LOC100709616	Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial. (345 aa)
	LOC100704158	Hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha a. (779 aa)
	echdc2	Enoyl CoA hydratase domain containing 2; Belongs to the enoyl-CoA hydratase/isomerase family. (277 aa)
	eci1	Enoyl-CoA delta isomerase 1; Belongs to the enoyl-CoA hydratase/isomerase family. (303 aa)

Your Current Organism:

Oreochromis niloticus

NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDYL2	ECHDC1	ENSONIP00000007046	ENSONIP00000009096	Chromodomain Y like 2.	Ethylmalonyl-CoA decarboxylase 1; Belongs to the enoyl-CoA hydratase/isomerase family.	0.624
CDYL2	ENSONIP00000028816	ENSONIP00000007046	ENSONIP00000028816	Chromodomain Y like 2.	annotation not available	0.572
CDYL2	Echs1	ENSONIP00000007046	ENSONIP00000012057	Chromodomain Y like 2.	Enoyl CoA hydratase, short chain, 1, mitochondrial; Belongs to the enoyl-CoA hydratase/isomerase family.	0.446
CDYL2	I3JQQ9_ORENI	ENSONIP00000007046	ENSONIP00000032766	Chromodomain Y like 2.	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	0.413
CDYL2	LOC100695384	ENSONIP00000007046	ENSONIP00000018331	Chromodomain Y like 2.	Zgc:101569; Belongs to the enoyl-CoA hydratase/isomerase family.	0.549
CDYL2	LOC100700973	ENSONIP00000007046	ENSONIP00000014128	Chromodomain Y like 2.	AU RNA binding protein/enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.	0.411
CDYL2	LOC100703423	ENSONIP00000007046	ENSONIP00000070131	Chromodomain Y like 2.	Hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b; Belongs to the enoyl-CoA hydratase/isomerase family.	0.438
CDYL2	LOC100704158	ENSONIP00000007046	ENSONIP00000037793	Chromodomain Y like 2.	Hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha a.	0.438
CDYL2	LOC100709616	ENSONIP00000007046	ENSONIP00000033387	Chromodomain Y like 2.	Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial.	0.749
CDYL2	cdyl	ENSONIP00000007046	ENSONIP00000017624	Chromodomain Y like 2.	Chromodomain protein, Y-like.	0.597
CDYL2	echdc2	ENSONIP00000007046	ENSONIP00000054770	Chromodomain Y like 2.	Enoyl CoA hydratase domain containing 2; Belongs to the enoyl-CoA hydratase/isomerase family.	0.408
CDYL2	eci1	ENSONIP00000007046	ENSONIP00000062751	Chromodomain Y like 2.	Enoyl-CoA delta isomerase 1; Belongs to the enoyl-CoA hydratase/isomerase family.	0.577
CDYL2	eci2	ENSONIP00000007046	ENSONIP00000021876	Chromodomain Y like 2.	Enoyl-CoA delta isomerase 2.	0.488
CDYL2	hibch	ENSONIP00000007046	ENSONIP00000009031	Chromodomain Y like 2.	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family.	0.563
ECHDC1	CDYL2	ENSONIP00000009096	ENSONIP00000007046	Ethylmalonyl-CoA decarboxylase 1; Belongs to the enoyl-CoA hydratase/isomerase family.	Chromodomain Y like 2.	0.624
ECHDC1	ENSONIP00000028816	ENSONIP00000009096	ENSONIP00000028816	Ethylmalonyl-CoA decarboxylase 1; Belongs to the enoyl-CoA hydratase/isomerase family.	annotation not available	0.570
ECHDC1	LOC100703423	ENSONIP00000009096	ENSONIP00000070131	Ethylmalonyl-CoA decarboxylase 1; Belongs to the enoyl-CoA hydratase/isomerase family.	Hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b; Belongs to the enoyl-CoA hydratase/isomerase family.	0.679
ECHDC1	LOC100704158	ENSONIP00000009096	ENSONIP00000037793	Ethylmalonyl-CoA decarboxylase 1; Belongs to the enoyl-CoA hydratase/isomerase family.	Hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha a.	0.679
ECHDC1	LOC100709616	ENSONIP00000009096	ENSONIP00000033387	Ethylmalonyl-CoA decarboxylase 1; Belongs to the enoyl-CoA hydratase/isomerase family.	Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial.	0.562
ECHDC1	cdyl	ENSONIP00000009096	ENSONIP00000017624	Ethylmalonyl-CoA decarboxylase 1; Belongs to the enoyl-CoA hydratase/isomerase family.	Chromodomain protein, Y-like.	0.591