(15 nodes) Mixed, incl. cAMP response element binding (CREB) protein, and Transducer of regulated CREB activity, N terminus network (Xenopus laevis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	crem	cAMP-responsive element modulator. (102 aa)
	creb3l4	BZIP domain-containing protein. (434 aa)
	A0A1L8F560	Uncharacterized protein. (860 aa)
	Apcs.L	Pentaxin. (223 aa)
	creb3l4-2	BZIP domain-containing protein. (458 aa)
	A0A1L8FD92	Uncharacterized protein. (807 aa)
	sik2	Uncharacterized protein. (896 aa)
	A0A1L8FQM0	BZIP domain-containing protein. (102 aa)
	creb3l2	BZIP domain-containing protein. (525 aa)
	crtc3	Uncharacterized protein. (662 aa)
	brwd1	Uncharacterized protein. (1957 aa)
	MGC85066	MGC85066 protein. (279 aa)
	atf1	LOC496344 protein. (280 aa)
	ankh	Ank protein. (492 aa)
	matn1	MGC64509 protein. (490 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8F560	MGC85066	A0A1L8F560	Q58E78	Uncharacterized protein.	MGC85066 protein.	0.575
A0A1L8F560	atf1	A0A1L8F560	Q5HZP0	Uncharacterized protein.	LOC496344 protein.	0.575
A0A1L8F560	crem	A0A1L8F560	A0A0U2UIU9	Uncharacterized protein.	cAMP-responsive element modulator.	0.575
A0A1L8F560	sik2	A0A1L8F560	A0A1L8FFT4	Uncharacterized protein.	Uncharacterized protein.	0.565
A0A1L8FD92	MGC85066	A0A1L8FD92	Q58E78	Uncharacterized protein.	MGC85066 protein.	0.575
A0A1L8FD92	atf1	A0A1L8FD92	Q5HZP0	Uncharacterized protein.	LOC496344 protein.	0.575
A0A1L8FD92	crem	A0A1L8FD92	A0A0U2UIU9	Uncharacterized protein.	cAMP-responsive element modulator.	0.575
A0A1L8FD92	sik2	A0A1L8FD92	A0A1L8FFT4	Uncharacterized protein.	Uncharacterized protein.	0.565
A0A1L8FQM0	brwd1	A0A1L8FQM0	A0A1L8HCE1	BZIP domain-containing protein.	Uncharacterized protein.	0.887
A0A1L8FQM0	creb3l2	A0A1L8FQM0	A0A1L8GQG2	BZIP domain-containing protein.	BZIP domain-containing protein.	0.773
A0A1L8FQM0	creb3l4	A0A1L8FQM0	A0A1L8F529	BZIP domain-containing protein.	BZIP domain-containing protein.	0.773
A0A1L8FQM0	creb3l4-2	A0A1L8FQM0	A0A1L8FD74	BZIP domain-containing protein.	BZIP domain-containing protein.	0.773
A0A1L8FQM0	crem	A0A1L8FQM0	A0A0U2UIU9	BZIP domain-containing protein.	cAMP-responsive element modulator.	0.901
Apcs.L	ankh	A0A1L8FBQ3	Q6NS07	Pentaxin.	Ank protein.	0.578
Apcs.L	creb3l2	A0A1L8FBQ3	A0A1L8GQG2	Pentaxin.	BZIP domain-containing protein.	0.428
Apcs.L	creb3l4	A0A1L8FBQ3	A0A1L8F529	Pentaxin.	BZIP domain-containing protein.	0.550
Apcs.L	creb3l4-2	A0A1L8FBQ3	A0A1L8FD74	Pentaxin.	BZIP domain-containing protein.	0.550
Apcs.L	matn1	A0A1L8FBQ3	Q7SYT5	Pentaxin.	MGC64509 protein.	0.670
MGC85066	A0A1L8F560	Q58E78	A0A1L8F560	MGC85066 protein.	Uncharacterized protein.	0.575
MGC85066	A0A1L8FD92	Q58E78	A0A1L8FD92	MGC85066 protein.	Uncharacterized protein.	0.575