9 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L8HJM7	Uncharacterized protein. (492 aa)
	A0A1L8HBL4	ANK_REP_REGION domain-containing protein. (263 aa)
	rnf222	RING-type domain-containing protein. (210 aa)
	Tgfb1i1.S	Uncharacterized protein; Belongs to the paxillin family. (561 aa)
	Rnf222.S	RING-type domain-containing protein. (255 aa)
	Tgfb1i1.L	Uncharacterized protein; Belongs to the paxillin family. (501 aa)
	A0A1L8HBK8	Protein kinase domain-containing protein. (116 aa)
	pxn-2	LOC397826 protein; Belongs to the paxillin family. (539 aa)
	pxn	Uncharacterized protein; Belongs to the paxillin family. (542 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8HBK8	Tgfb1i1.L	A0A1L8HBK8	A0A1L8EYV7	Protein kinase domain-containing protein.	Uncharacterized protein; Belongs to the paxillin family.	0.516
A0A1L8HBK8	Tgfb1i1.S	A0A1L8HBK8	A0A1L8ER43	Protein kinase domain-containing protein.	Uncharacterized protein; Belongs to the paxillin family.	0.516
A0A1L8HBK8	pxn	A0A1L8HBK8	A0A1L8I058	Protein kinase domain-containing protein.	Uncharacterized protein; Belongs to the paxillin family.	0.516
A0A1L8HBK8	pxn-2	A0A1L8HBK8	Q9I957	Protein kinase domain-containing protein.	LOC397826 protein; Belongs to the paxillin family.	0.516
A0A1L8HBL4	Tgfb1i1.L	A0A1L8HBL4	A0A1L8EYV7	ANK_REP_REGION domain-containing protein.	Uncharacterized protein; Belongs to the paxillin family.	0.593
A0A1L8HBL4	Tgfb1i1.S	A0A1L8HBL4	A0A1L8ER43	ANK_REP_REGION domain-containing protein.	Uncharacterized protein; Belongs to the paxillin family.	0.589
A0A1L8HBL4	pxn	A0A1L8HBL4	A0A1L8I058	ANK_REP_REGION domain-containing protein.	Uncharacterized protein; Belongs to the paxillin family.	0.985
A0A1L8HBL4	pxn-2	A0A1L8HBL4	Q9I957	ANK_REP_REGION domain-containing protein.	LOC397826 protein; Belongs to the paxillin family.	0.985
A0A1L8HJM7	Tgfb1i1.L	A0A1L8HJM7	A0A1L8EYV7	Uncharacterized protein.	Uncharacterized protein; Belongs to the paxillin family.	0.516
A0A1L8HJM7	Tgfb1i1.S	A0A1L8HJM7	A0A1L8ER43	Uncharacterized protein.	Uncharacterized protein; Belongs to the paxillin family.	0.516
A0A1L8HJM7	pxn	A0A1L8HJM7	A0A1L8I058	Uncharacterized protein.	Uncharacterized protein; Belongs to the paxillin family.	0.516
A0A1L8HJM7	pxn-2	A0A1L8HJM7	Q9I957	Uncharacterized protein.	LOC397826 protein; Belongs to the paxillin family.	0.516
Tgfb1i1.L	A0A1L8HBK8	A0A1L8EYV7	A0A1L8HBK8	Uncharacterized protein; Belongs to the paxillin family.	Protein kinase domain-containing protein.	0.516
Tgfb1i1.L	A0A1L8HBL4	A0A1L8EYV7	A0A1L8HBL4	Uncharacterized protein; Belongs to the paxillin family.	ANK_REP_REGION domain-containing protein.	0.593
Tgfb1i1.L	A0A1L8HJM7	A0A1L8EYV7	A0A1L8HJM7	Uncharacterized protein; Belongs to the paxillin family.	Uncharacterized protein.	0.516
Tgfb1i1.S	A0A1L8HBK8	A0A1L8ER43	A0A1L8HBK8	Uncharacterized protein; Belongs to the paxillin family.	Protein kinase domain-containing protein.	0.516
Tgfb1i1.S	A0A1L8HBL4	A0A1L8ER43	A0A1L8HBL4	Uncharacterized protein; Belongs to the paxillin family.	ANK_REP_REGION domain-containing protein.	0.589
Tgfb1i1.S	A0A1L8HJM7	A0A1L8ER43	A0A1L8HJM7	Uncharacterized protein; Belongs to the paxillin family.	Uncharacterized protein.	0.516
pxn	A0A1L8HBK8	A0A1L8I058	A0A1L8HBK8	Uncharacterized protein; Belongs to the paxillin family.	Protein kinase domain-containing protein.	0.516
pxn	A0A1L8HBL4	A0A1L8I058	A0A1L8HBL4	Uncharacterized protein; Belongs to the paxillin family.	ANK_REP_REGION domain-containing protein.	0.985