STRINGSTRING
pxn pxn rnf185 rnf185 rnf185-2 rnf185-2 actl6a actl6a pxn-2 pxn-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pxnUncharacterized protein; Belongs to the paxillin family. (542 aa)
rnf185LOC495261 protein. (189 aa)
rnf185-2MGC84239 protein. (189 aa)
actl6aBaf53a-pending-prov protein; Belongs to the actin family. (429 aa)
pxn-2LOC397826 protein; Belongs to the paxillin family. (539 aa)
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
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